RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ASIPP42127 132 aa11.15□□□□□ -0.62
COL1A1-205ENST00000476387 RAB5CP51148 216 aa11.15□□□□□ -0.62
COL1A1-205ENST00000476387 NEGR1Q7Z3B1 354 aa11.15□□□□□ -0.62
COL1A1-205ENST00000476387 AKAP14Q86UN6 197 aa11.15□□□□□ -0.62
COL1A1-205ENST00000476387 ZC2HC1AQ96GY0 325 aa11.15□□□□□ -0.62
COL1A1-205ENST00000476387 hCG_2014768A0A024R1R8 64 aa11.14□□□□□ -0.63
COL1A1-205ENST00000476387 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
COL1A1-205ENST00000476387 TEX46H3BTG2 121 aa11.14□□□□□ -0.63
COL1A1-205ENST00000476387 LTAP01374 205 aa11.14□□□□□ -0.63
COL1A1-205ENST00000476387 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
COL1A1-205ENST00000476387 GYPEP15421 78 aa11.14□□□□□ -0.63
COL1A1-205ENST00000476387 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
COL1A1-205ENST00000476387 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 K7EQD1 137 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 CIDEAO60543 219 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 SH2D1AO60880 128 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 S100A9P06702 114 aaKnown RBP11.13□□□□□ -0.63
COL1A1-205ENST00000476387 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 COX8CQ7Z4L0 72 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 TXNDC17Q9BRA2 123 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 KRTAP1-5Q9BYS1 174 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
COL1A1-205ENST00000476387 M0R036 132 aa11.12□□□□□ -0.63
COL1A1-205ENST00000476387 RS1O15537 224 aa11.12□□□□□ -0.63
COL1A1-205ENST00000476387 NXPH4O95158 308 aa11.12□□□□□ -0.63
COL1A1-205ENST00000476387 GATA1P15976 413 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-205ENST00000476387 CFAP126Q5VTH2 177 aa11.12□□□□□ -0.63
COL1A1-205ENST00000476387 SLC51BQ86UW2 128 aa11.12□□□□□ -0.63
COL1A1-205ENST00000476387 PTH2Q96A98 100 aa11.12□□□□□ -0.63
COL1A1-205ENST00000476387 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
COL1A1-205ENST00000476387 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
COL1A1-205ENST00000476387 H3BVH4 76 aa11.11□□□□□ -0.63
COL1A1-205ENST00000476387 SIVA1O15304 175 aa11.11□□□□□ -0.63
COL1A1-205ENST00000476387 CDK2AP2O75956 126 aa11.11□□□□□ -0.63
COL1A1-205ENST00000476387 NHLRC2Q8NBF2 726 aa11.11□□□□□ -0.63
COL1A1-205ENST00000476387 IL36BQ9NZH7 164 aa11.11□□□□□ -0.63
COL1A1-205ENST00000476387 TRAV1-1A0A0B4J248 108 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 SULT1A2P50226 295 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 CRIP1P50238 77 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 PRADC1Q9BSG0 188 aa11.1□□□□□ -0.63
COL1A1-205ENST00000476387 ABCA13Q86UQ4 5058 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 IGHV3-73A0A0B4J1V6 119 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 A8MWV9 139 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 RHOHQ15669 191 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 SYT8Q8NBV8 401 aa11.09□□□□□ -0.63
COL1A1-205ENST00000476387 TMSB15BA0A087X1C1 80 aa11.08□□□□□ -0.64
COL1A1-205ENST00000476387 GRIFINA4D1Z8 144 aa11.08□□□□□ -0.64
COL1A1-205ENST00000476387 IFNA1P01562 189 aa11.08□□□□□ -0.64
COL1A1-205ENST00000476387 MGST1P10620 155 aaKnown RBP11.08□□□□□ -0.64
COL1A1-205ENST00000476387 DNLZQ5SXM8 178 aa11.08□□□□□ -0.64
COL1A1-205ENST00000476387 SPATA12Q7Z6I5 190 aa11.08□□□□□ -0.64
COL1A1-205ENST00000476387 BAGE2Q86Y30 109 aa11.08□□□□□ -0.64
COL1A1-205ENST00000476387 SLC25A29Q8N8R3 303 aa11.08□□□□□ -0.64
COL1A1-205ENST00000476387 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
COL1A1-205ENST00000476387 ARMS2P0C7Q2 107 aa11.07□□□□□ -0.64
COL1A1-205ENST00000476387 CCL20P78556 96 aa11.07□□□□□ -0.64
COL1A1-205ENST00000476387 PARLQ9H300 379 aa11.07□□□□□ -0.64
COL1A1-205ENST00000476387 PHLDA3Q9Y5J5 127 aa11.07□□□□□ -0.64
COL1A1-205ENST00000476387 HSPG2P98160 4391 aa11.07□□□□□ -0.64
COL1A1-205ENST00000476387 RPL35P42766 123 aaKnown RBP11.06□□□□□ -0.64
COL1A1-205ENST00000476387 ZFP2Q6ZN57 461 aa11.06□□□□□ -0.64
COL1A1-205ENST00000476387 C9orf62Q8N4C0 152 aa11.06□□□□□ -0.64
COL1A1-205ENST00000476387 LRP1BQ9NZR2 4599 aa11.06□□□□□ -0.64
COL1A1-205ENST00000476387 RHODO00212 210 aa11.05□□□□□ -0.64
COL1A1-205ENST00000476387 LINC00315P59091 139 aa11.05□□□□□ -0.64
COL1A1-205ENST00000476387 PRR27Q6MZM9 219 aa11.05□□□□□ -0.64
COL1A1-205ENST00000476387 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
COL1A1-205ENST00000476387 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
COL1A1-205ENST00000476387 LY96Q9Y6Y9 160 aa11.05□□□□□ -0.64
COL1A1-205ENST00000476387 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
COL1A1-205ENST00000476387 M0R381 172 aa11.04□□□□□ -0.64
COL1A1-205ENST00000476387 MEF2BQ02080 365 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-205ENST00000476387 DMRTA1Q5VZB9 504 aa11.04□□□□□ -0.64
COL1A1-205ENST00000476387 WFDC10BQ8IUB3 73 aa11.04□□□□□ -0.64
COL1A1-205ENST00000476387 ZFP82Q8N141 532 aa11.04□□□□□ -0.64
COL1A1-205ENST00000476387 DERL1Q9BUN8 251 aa11.04□□□□□ -0.64
COL1A1-205ENST00000476387 KRTAP4-5Q9BYR2 181 aa11.04□□□□□ -0.64
COL1A1-205ENST00000476387 PDE6DO43924 150 aa11.03□□□□□ -0.64
COL1A1-205ENST00000476387 TIRAPP58753 221 aa11.03□□□□□ -0.64
COL1A1-205ENST00000476387 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
COL1A1-205ENST00000476387 Q6ZRN7 208 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-205ENST00000476387 JPT2Q9H910 190 aa11.03□□□□□ -0.64
COL1A1-205ENST00000476387 CXCL1P09341 107 aa11.02□□□□□ -0.65
COL1A1-205ENST00000476387 BCL2P10415 239 aa11.02□□□□□ -0.65
COL1A1-205ENST00000476387 EVI2AP22794 236 aa11.02□□□□□ -0.65
COL1A1-205ENST00000476387 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
COL1A1-205ENST00000476387 CENPWQ5EE01 88 aa11.02□□□□□ -0.65
COL1A1-205ENST00000476387 SCRT2Q9NQ03 307 aa11.02□□□□□ -0.65
COL1A1-205ENST00000476387 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 K7EP13 123 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 TAGLN2P37802 199 aaKnown RBP11.01□□□□□ -0.65
COL1A1-205ENST00000476387 GNG4P50150 75 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms