RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 A8MWL6 223 aa13.39□□□□□ -0.27
ATG4B-217ENST00000475693 HBBP68871 147 aa13.39□□□□□ -0.27
ATG4B-217ENST00000475693 CLEC5AQ9NY25 188 aa13.39□□□□□ -0.27
ATG4B-217ENST00000475693 RBAKDNA6NC62 111 aa13.39□□□□□ -0.27
ATG4B-217ENST00000475693 NPIPB6E9PJ23 425 aa13.39□□□□□ -0.27
ATG4B-217ENST00000475693 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
ATG4B-217ENST00000475693 DNHD1Q96M86 4753 aa13.39□□□□□ -0.27
ATG4B-217ENST00000475693 SERTM2A0A1B0GWG4 89 aa13.38□□□□□ -0.27
ATG4B-217ENST00000475693 C9orf66Q5T8R8 295 aa13.38□□□□□ -0.27
ATG4B-217ENST00000475693 TMEM70Q9BUB7 260 aa13.38□□□□□ -0.27
ATG4B-217ENST00000475693 TRAV12-2A0A075B6T6 113 aa13.37□□□□□ -0.27
ATG4B-217ENST00000475693 C19orf71A6NCJ1 209 aa13.37□□□□□ -0.27
ATG4B-217ENST00000475693 OR2D3Q8NGH3 330 aa13.37□□□□□ -0.27
ATG4B-217ENST00000475693 NOTCH1P46531 2555 aa13.37□□□□□ -0.27
ATG4B-217ENST00000475693 RBMY1BA6NDE4 496 aaKnown RBP13.37□□□□□ -0.27
ATG4B-217ENST00000475693 RBMY1EA6NEQ0 496 aaKnown RBP13.37□□□□□ -0.27
ATG4B-217ENST00000475693 RBMY1DP0C7P1 496 aaKnown RBP13.37□□□□□ -0.27
ATG4B-217ENST00000475693 ST20Q9HBF5 79 aa13.37□□□□□ -0.27
ATG4B-217ENST00000475693 TRBV6-1A0A0K0K1D8 114 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 BEAN1Q3B7T3 259 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 SAMD13Q5VXD3 122 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 RNASEKQ6P5S7 137 aaKnown RBP13.36□□□□□ -0.27
ATG4B-217ENST00000475693 TRAV2A0A0B4J234 112 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 OR5AL1P0C617 328 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 LINC00477Q96M19 166 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 C19orf73Q9NVV2 129 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 COX11Q9Y6N1 276 aa13.36□□□□□ -0.27
ATG4B-217ENST00000475693 TMSB15BA0A087X1C1 80 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 OR11H12B2RN74 326 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 H3BMM0 161 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 SPINK13Q1W4C9 94 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 FOXI2Q6ZQN5 318 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 ZFAND2AQ8N6M9 145 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 SVIPQ8NHG7 77 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 URB1-AS1Q96HZ7 61 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 RNASE4P34096 147 aaKnown RBP13.35□□□□□ -0.27
ATG4B-217ENST00000475693 CAMPP49913 170 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 NDFIP1Q9BT67 221 aa13.35□□□□□ -0.27
ATG4B-217ENST00000475693 SH2D1AO60880 128 aa13.34□□□□□ -0.27
ATG4B-217ENST00000475693 P01737 135 aa13.34□□□□□ -0.27
ATG4B-217ENST00000475693 UBE2V1Q13404 147 aa13.34□□□□□ -0.27
ATG4B-217ENST00000475693 SAPCD1Q5SSQ6 148 aa13.34□□□□□ -0.27
ATG4B-217ENST00000475693 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
ATG4B-217ENST00000475693 SSBP4Q9BWG4 385 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-217ENST00000475693 C11orf21Q9P2W6 132 aa13.34□□□□□ -0.27
ATG4B-217ENST00000475693 NBEAL2Q6ZNJ1 2754 aa13.34□□□□□ -0.27
ATG4B-217ENST00000475693 MAJINQ3KP22 176 aa13.33□□□□□ -0.27
ATG4B-217ENST00000475693 ATOH7Q8N100 152 aa13.33□□□□□ -0.27
ATG4B-217ENST00000475693 FAM19A4Q96LR4 140 aa13.33□□□□□ -0.27
ATG4B-217ENST00000475693 AMTNQ6UX39 209 aa13.33□□□□□ -0.28
ATG4B-217ENST00000475693 NBEAL1Q6ZS30 2694 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 HLA-DRB4P13762 266 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 INSL3P51460 131 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 PTTG1IPP53801 180 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 HLA-DRB4X5D2U9 266 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 MGAM2Q2M2H8 2515 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 HINT1P49773 126 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-217ENST00000475693 FOXA3P55318 350 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-217ENST00000475693 COTL1Q14019 142 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 OR2K2Q8NGT1 345 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 GTSF1Q8WW33 167 aa13.32□□□□□ -0.28
ATG4B-217ENST00000475693 SYS1-DBNDD2H3BUS1 97 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 CCL25O15444 150 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 PRM2P04554 102 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 ZNF575Q86XF7 245 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 DAZAP1Q96EP5 407 aaKnown RBP13.31□□□□□ -0.28
ATG4B-217ENST00000475693 TRAV12-3A0A0B4J271 114 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 G3V4G9 280 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 K7EP13 123 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 RPL35AP18077 110 aaKnown RBP13.31□□□□□ -0.28
ATG4B-217ENST00000475693 KRTAP10-11P60412 298 aa13.31□□□□□ -0.28
ATG4B-217ENST00000475693 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
ATG4B-217ENST00000475693 LEPROTL1O95214 131 aa13.3□□□□□ -0.28
ATG4B-217ENST00000475693 MUC21Q5SSG8 566 aa13.3□□□□□ -0.28
ATG4B-217ENST00000475693 PET117Q6UWS5 81 aa13.3□□□□□ -0.28
ATG4B-217ENST00000475693 MCRIP2Q9BUT9 160 aaKnown RBP13.3□□□□□ -0.28
ATG4B-217ENST00000475693 LOC102724200A0A096LPH7 203 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-217ENST00000475693 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
ATG4B-217ENST00000475693 STHQ8IWL8 128 aa13.29□□□□□ -0.28
ATG4B-217ENST00000475693 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
ATG4B-217ENST00000475693 TMEM191AQ9H0A3 160 aa13.29□□□□□ -0.28
ATG4B-217ENST00000475693 ORM1P02763 201 aa13.29□□□□□ -0.28
ATG4B-217ENST00000475693 COX8CQ7Z4L0 72 aa13.29□□□□□ -0.28
ATG4B-217ENST00000475693 SPATA12Q7Z6I5 190 aa13.29□□□□□ -0.28
ATG4B-217ENST00000475693 FBLL1A6NHQ2 334 aaKnown RBP13.28□□□□□ -0.28
ATG4B-217ENST00000475693 SPRY2O43597 315 aa13.28□□□□□ -0.28
ATG4B-217ENST00000475693 RBMY1A1P0DJD3 496 aaKnown RBP13.28□□□□□ -0.28
ATG4B-217ENST00000475693 RBMY1CP0DJD4 496 aa13.28□□□□□ -0.28
ATG4B-217ENST00000475693 RPS20P60866 119 aaKnown RBP13.28□□□□□ -0.28
ATG4B-217ENST00000475693 RBMY1FQ15415 496 aaKnown RBP13.28□□□□□ -0.28
ATG4B-217ENST00000475693 DNAH3Q8TD57 4116 aa13.28□□□□□ -0.28
ATG4B-217ENST00000475693 MUC21A0A0G2JKD1 596 aa13.28□□□□□ -0.28
ATG4B-217ENST00000475693 MUC21A0A140T8X8 626 aa13.28□□□□□ -0.28
ATG4B-217ENST00000475693 A0A1B0GW15 77 aa13.28□□□□□ -0.28
ATG4B-217ENST00000475693 DUSP14O95147 198 aaKnown RBP13.28□□□□□ -0.28
ATG4B-217ENST00000475693 XCL2Q9UBD3 114 aa13.28□□□□□ -0.28
ATG4B-217ENST00000475693 IGKV3D-20A0A0C4DH25 116 aa13.27□□□□□ -0.28
ATG4B-217ENST00000475693 FABP5P3A8MUU1 101 aa13.27□□□□□ -0.28
ATG4B-217ENST00000475693 KLLNB2CW77 178 aa13.27□□□□□ -0.28
ATG4B-217ENST00000475693 PGLYRP4Q96LB8 373 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms