RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 MED14OSP0DP75 135 aa13.58□□□□□ -0.24
SEC61A2-213ENST00000475268 ZNF124Q15973 351 aa13.58□□□□□ -0.24
SEC61A2-213ENST00000475268 TDRG1Q3Y452 100 aa13.58□□□□□ -0.24
SEC61A2-213ENST00000475268 SCRT2Q9NQ03 307 aa13.58□□□□□ -0.24
SEC61A2-213ENST00000475268 GATA1P15976 413 aaPredicted RBP13.58□□□□□ -0.24
SEC61A2-213ENST00000475268 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
SEC61A2-213ENST00000475268 TEX43Q6ZNM6 134 aa13.58□□□□□ -0.24
SEC61A2-213ENST00000475268 BTF3P20290 206 aaKnown RBP13.57□□□□□ -0.24
SEC61A2-213ENST00000475268 FXYD7P58549 80 aa13.57□□□□□ -0.24
SEC61A2-213ENST00000475268 LINC00173Q6ZV60 143 aa13.57□□□□□ -0.24
SEC61A2-213ENST00000475268 TRAV26-2A0A0B4J265 109 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 OR4C46A6NHA9 309 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 TNFRSF6BO95407 300 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 PROK1P58294 105 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 MAP6D1Q9H9H5 199 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 HLA-DRB4P13762 266 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 MAP1LC3AQ9H492 121 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 HLA-DRB4X5D2U9 266 aa13.56□□□□□ -0.24
SEC61A2-213ENST00000475268 SPAG8Q99932 426 aaPredicted RBP13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 LAMTOR2Q9Y2Q5 125 aa13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 WNK1Q9H4A3 2382 aa13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 H3BMM0 161 aa13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 NSUN5P1Q3KNT7 163 aa13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 C14orf178Q8N769 122 aaPredicted RBP13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 TMEM70Q9BUB7 260 aa13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
SEC61A2-213ENST00000475268 VAMP8Q9BV40 100 aa13.54□□□□□ -0.24
SEC61A2-213ENST00000475268 SETXQ7Z333 2677 aaKnown RBP13.54□□□□□ -0.24
SEC61A2-213ENST00000475268 DDTP30046 118 aa13.54□□□□□ -0.24
SEC61A2-213ENST00000475268 OR2K2Q8NGT1 345 aa13.54□□□□□ -0.24
SEC61A2-213ENST00000475268 HSPB8Q9UJY1 196 aa13.54□□□□□ -0.24
SEC61A2-213ENST00000475268 PAM16Q9Y3D7 125 aa13.54□□□□□ -0.24
SEC61A2-213ENST00000475268 TRAV25A0A0B4J276 109 aa13.53□□□□□ -0.24
SEC61A2-213ENST00000475268 IGHV1OR15-1A0A075B7D0 117 aa13.52□□□□□ -0.24
SEC61A2-213ENST00000475268 Q8N1Y9 231 aa13.52□□□□□ -0.24
SEC61A2-213ENST00000475268 DPH3P1Q9H4G8 78 aa13.52□□□□□ -0.24
SEC61A2-213ENST00000475268 IGHV3-16A0A0C4DH30 117 aa13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 RBMY1BA6NDE4 496 aaKnown RBP13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 RBMY1EA6NEQ0 496 aaKnown RBP13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 ADARB2-AS1A8MUL3 147 aa13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 RBMY1DP0C7P1 496 aaKnown RBP13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 SPATA12Q7Z6I5 190 aa13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 ATOH7Q8N100 152 aa13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 AP1S3Q96PC3 154 aa13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 MDFICQ9P1T7 246 aa13.52□□□□□ -0.25
SEC61A2-213ENST00000475268 A0A096LNJ9 63 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 SYS1-DBNDD2H3BUS1 97 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 NRACQ8N912 160 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 A8MTW9 85 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 SAP30O75446 220 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 NXPH4O95158 308 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 MGPP08493 103 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 MRAP2Q96G30 205 aa13.51□□□□□ -0.25
SEC61A2-213ENST00000475268 KIR2DL5BA0A0G2JN68 375 aa13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 KIR2DL5BA0A0G2JPC4 375 aa13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 H0Y8G0 127 aa13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 RBMY1A1P0DJD3 496 aaKnown RBP13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 RBMY1CP0DJD4 496 aa13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 RBMY1FQ15415 496 aaKnown RBP13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 KIR2DL5AQ8N109 375 aa13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 MUC4Q99102 2169 aa13.5□□□□□ -0.25
SEC61A2-213ENST00000475268 HTN1P15515 57 aa13.49□□□□□ -0.25
SEC61A2-213ENST00000475268 KRTAP10-3P60369 221 aa13.49□□□□□ -0.25
SEC61A2-213ENST00000475268 ODF3L2Q3SX64 289 aa13.49□□□□□ -0.25
SEC61A2-213ENST00000475268 C9orf85Q96MD7 179 aa13.49□□□□□ -0.25
SEC61A2-213ENST00000475268 ZNF747Q9BV97 191 aa13.49□□□□□ -0.25
SEC61A2-213ENST00000475268 NSD1Q96L73 2696 aaPredicted RBP13.49□□□□□ -0.25
SEC61A2-213ENST00000475268 HBDP02042 147 aa13.48□□□□□ -0.25
SEC61A2-213ENST00000475268 HIVEP1P15822 2718 aa13.48□□□□□ -0.25
SEC61A2-213ENST00000475268 CBY3A6NI87 242 aa13.48□□□□□ -0.25
SEC61A2-213ENST00000475268 SMIM17P0DL12 118 aa13.48□□□□□ -0.25
SEC61A2-213ENST00000475268 FOSL1P15407 271 aa13.48□□□□□ -0.25
SEC61A2-213ENST00000475268 JPT2Q9H910 190 aa13.48□□□□□ -0.25
SEC61A2-213ENST00000475268 DEFA6Q01524 100 aa13.47□□□□□ -0.25
SEC61A2-213ENST00000475268 Q8N8P6 123 aa13.47□□□□□ -0.25
SEC61A2-213ENST00000475268 MCRIP2Q9BUT9 160 aaKnown RBP13.47□□□□□ -0.25
SEC61A2-213ENST00000475268 C20orf202A1L168 122 aa13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 LINC01546A6NGU7 62 aa13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 OR11H12B2RN74 326 aa13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 SPATA45Q537H7 98 aa13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 RASL10AQ92737 203 aa13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 C20orf144Q9BQM9 153 aa13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 KIF25-AS1Q9Y6Z4 181 aa13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 NIPBLQ6KC79 2804 aaeCLIP13.46□□□□□ -0.25
SEC61A2-213ENST00000475268 IGLV2-18A0A075B6J9 118 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 TRGV11A0A075B6L2 103 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 A0A087WWL8 130 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 MAJINQ3KP22 176 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 PET117Q6UWS5 81 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 ZNF705AQ6ZN79 300 aaPredicted RBP13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 SYT8Q8NBV8 401 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 RPL39LQ96EH5 51 aaKnown RBP13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 PRSS47A8MTI9 375 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 NDUFA11Q86Y39 141 aa13.45□□□□□ -0.26
SEC61A2-213ENST00000475268 LINC00315P59091 139 aa13.44□□□□□ -0.26
SEC61A2-213ENST00000475268 STHQ8IWL8 128 aa13.44□□□□□ -0.26
SEC61A2-213ENST00000475268 DEFB125Q8N687 156 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms