RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 LGALS9BQ3B8N2 356 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 CEMP1Q6PRD7 247 aaPredicted RBP4.91□□□□□ -1.62
LIMD1-204ENST00000474665 LINC01551Q86U37 167 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 NUDT10Q8NFP7 164 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 RASL10AQ92737 203 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 SMIM12Q96EX1 92 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 NUDT11Q96G61 164 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 KCNS1Q96KK3 526 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 C18orf15Q96N68 181 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 SMIM7Q9BQ49 75 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 RNASE7Q9H1E1 156 aaKnown RBP4.91□□□□□ -1.62
LIMD1-204ENST00000474665 SMDT1Q9H4I9 107 aa4.91□□□□□ -1.62
LIMD1-204ENST00000474665 DEFB131BA0A096LNP1 70 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 ZNF727A8MUV8 499 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 H3BVH4 76 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 M0R2P5 195 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 ARMS2P0C7Q2 107 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 SPXQ9BT56 116 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 SSBP4Q9BWG4 385 aaPredicted RBP4.9□□□□□ -1.63
LIMD1-204ENST00000474665 JPT2Q9H910 190 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 IL36BQ9NZH7 164 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 LY96Q9Y6Y9 160 aa4.9□□□□□ -1.63
LIMD1-204ENST00000474665 TRAV10A0A0B4J240 114 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 TEX48A0A1B0GUV7 120 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 LINC00862A6NCI5 91 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 SNAI2O43623 268 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 NXPH4O95158 308 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 SFTA3P0C7M3 94 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 IGLC6P0CF74 106 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 HTN3P15516 51 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 ADCYAP1P18509 176 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 ASIPP42127 132 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 RPL23P62829 140 aaKnown RBP4.89□□□□□ -1.63
LIMD1-204ENST00000474665 TMEM241Q24JQ0 296 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 SOHLH1Q5JUK2 328 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 DMRTA1Q5VZB9 504 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 UFSP1Q6NVU6 142 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 FAM231DQ6ZW35 169 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 OR2D3Q8NGH3 330 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 OR10AG1Q8NH19 301 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 PTH2Q96A98 100 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 ISOC2Q96AB3 205 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 ZNF479Q96JC4 524 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 SAMD10Q9BYL1 202 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 APLNQ9ULZ1 77 aa4.89□□□□□ -1.63
LIMD1-204ENST00000474665 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 NUPR2A6NF83 97 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 P01737 135 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 IGHV3-53P01767 116 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 CXCL1P09341 107 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 OR5AL1P0C617 328 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 FHL2Q14192 279 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 ZNF876PQ49A33 203 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 FAM74A3Q4VXF1 159 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 CFAP126Q5VTH2 177 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 TMEM88Q6PEY1 159 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 Q6ZSN1 163 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 COMMD7Q86VX2 200 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 GTSF1Q8WW33 167 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 VSIG2Q96IQ7 327 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 NAT8Q9UHE5 227 aa4.88□□□□□ -1.63
LIMD1-204ENST00000474665 TRGV2A0A075B6R0 118 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 IGHV4-4A0A075B6R2 117 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 TMEM218A2RU14 115 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 F5H768 121 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 RS1O15537 224 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 ATP5G1P05496 136 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 CRYGDP07320 174 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 S100A4P26447 101 aaKnown RBP4.87□□□□□ -1.63
LIMD1-204ENST00000474665 PIK3CD-AS1Q5SR53 167 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 RPP21Q9H633 154 aaKnown RBP4.87□□□□□ -1.63
LIMD1-204ENST00000474665 BIN3Q9NQY0 253 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 OSTCQ9NRP0 149 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 MSRB1Q9NZV6 116 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 Q9UF83 564 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 V9GYV3 84 aa4.87□□□□□ -1.63
LIMD1-204ENST00000474665 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 DYNC1H1Q14204 4646 aaKnown RBP4.86□□□□□ -1.63
LIMD1-204ENST00000474665 TRAV26-1A0A087WT03 109 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 TRAV4A0A0B4J268 109 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 IGLL5B9A064 214 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 M0R381 172 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 GATA1P15976 413 aaPredicted RBP4.86□□□□□ -1.63
LIMD1-204ENST00000474665 CTRLP40313 264 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 LINC00315P59091 139 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 ERVFC1-1P60608 527 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 ADIRFQ15847 76 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 UQCC3Q6UW78 93 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 LYZL1Q6UWQ5 148 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 FER1L6-AS1Q8NA97 138 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 DAZAP1Q96EP5 407 aaKnown RBP4.86□□□□□ -1.63
LIMD1-204ENST00000474665 CNFNQ9BYD5 112 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 KIF25-AS1Q9Y6Z4 181 aa4.86□□□□□ -1.63
LIMD1-204ENST00000474665 A0A087WWL8 130 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 IGHV3-73A0A0B4J1V6 119 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 A0A0J9YY99 117 aa4.85□□□□□ -1.63
LIMD1-204ENST00000474665 GATCO43716 136 aaKnown RBP4.85□□□□□ -1.63
LIMD1-204ENST00000474665 CRYBA4P53673 196 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms