RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 TMEM88Q6PEY1 159 aa11.08□□□□□ -0.64
COL1A1-204ENST00000474644 PTH2Q96A98 100 aa11.08□□□□□ -0.64
COL1A1-204ENST00000474644 SCRT2Q9NQ03 307 aa11.08□□□□□ -0.64
COL1A1-204ENST00000474644 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
COL1A1-204ENST00000474644 IGHV3-53P01767 116 aa11.07□□□□□ -0.64
COL1A1-204ENST00000474644 FAM74A3Q4VXF1 159 aa11.07□□□□□ -0.64
COL1A1-204ENST00000474644 LINC01551Q86U37 167 aa11.07□□□□□ -0.64
COL1A1-204ENST00000474644 NUDT10Q8NFP7 164 aa11.07□□□□□ -0.64
COL1A1-204ENST00000474644 OR2D3Q8NGH3 330 aa11.07□□□□□ -0.64
COL1A1-204ENST00000474644 NUDT11Q96G61 164 aa11.07□□□□□ -0.64
COL1A1-204ENST00000474644 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
COL1A1-204ENST00000474644 MED14OSP0DP75 135 aa11.06□□□□□ -0.64
COL1A1-204ENST00000474644 TCTAP57738 103 aa11.06□□□□□ -0.64
COL1A1-204ENST00000474644 POM121L12Q8N7R1 296 aa11.06□□□□□ -0.64
COL1A1-204ENST00000474644 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
COL1A1-204ENST00000474644 NDUFAF3Q9BU61 184 aa11.06□□□□□ -0.64
COL1A1-204ENST00000474644 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
COL1A1-204ENST00000474644 APLNQ9ULZ1 77 aa11.06□□□□□ -0.64
COL1A1-204ENST00000474644 TRAV4A0A0B4J268 109 aa11.05□□□□□ -0.64
COL1A1-204ENST00000474644 SFTA3P0C7M3 94 aa11.05□□□□□ -0.64
COL1A1-204ENST00000474644 GZMBP10144 247 aa11.05□□□□□ -0.64
COL1A1-204ENST00000474644 RPS20P60866 119 aaKnown RBP11.05□□□□□ -0.64
COL1A1-204ENST00000474644 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
COL1A1-204ENST00000474644 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
COL1A1-204ENST00000474644 SNAI2O43623 268 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 TMEM241Q24JQ0 296 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 SOHLH1Q5JUK2 328 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 PIK3CD-AS1Q5SR53 167 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 SYT8Q8NBV8 401 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 OR4C5Q8NGB2 326 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
COL1A1-204ENST00000474644 TRAV26-1A0A087WT03 109 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 M0R381 172 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 RS1O15537 224 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 OR5AL1P0C617 328 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 IGLC6P0CF74 106 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
COL1A1-204ENST00000474644 FHL2Q14192 279 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 CFAP126Q5VTH2 177 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 OR10AG1Q8NH19 301 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-204ENST00000474644 MUC4Q99102 2169 aa11.03□□□□□ -0.64
COL1A1-204ENST00000474644 ALMS1Q8TCU4 4167 aa11.02□□□□□ -0.64
COL1A1-204ENST00000474644 A0A0J9YY99 117 aa11.02□□□□□ -0.65
COL1A1-204ENST00000474644 XKRY2A2RUG3 117 aa11.02□□□□□ -0.65
COL1A1-204ENST00000474644 NXPH4O95158 308 aa11.02□□□□□ -0.65
COL1A1-204ENST00000474644 ERVFC1-1P60608 527 aa11.02□□□□□ -0.65
COL1A1-204ENST00000474644 ZFP82Q8N141 532 aa11.02□□□□□ -0.65
COL1A1-204ENST00000474644 FER1L6-AS1Q8NA97 138 aa11.02□□□□□ -0.65
COL1A1-204ENST00000474644 LYSTQ99698 3801 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 SACSQ9NZJ4 4579 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 TRGV4A0A0C4DH28 118 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 MUC21A0A0G2JKD1 596 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 MUC21A0A140T8X8 626 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 A8MWV9 139 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 GATCO43716 136 aaKnown RBP11.01□□□□□ -0.65
COL1A1-204ENST00000474644 ADIRFQ15847 76 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 ISOC2Q96AB3 205 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 VSIG2Q96IQ7 327 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 TPPP3Q9BW30 176 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 JPT2Q9H910 190 aa11.01□□□□□ -0.65
COL1A1-204ENST00000474644 LCE6AA0A183 80 aa11□□□□□ -0.65
COL1A1-204ENST00000474644 UQCC3Q6UW78 93 aa11□□□□□ -0.65
COL1A1-204ENST00000474644 COMMD7Q86VX2 200 aa11□□□□□ -0.65
COL1A1-204ENST00000474644 LINC00476Q8WZB0 136 aa11□□□□□ -0.65
COL1A1-204ENST00000474644 OSTCQ9NRP0 149 aa11□□□□□ -0.65
COL1A1-204ENST00000474644 PRO0255Q9UI72 69 aa11□□□□□ -0.65
COL1A1-204ENST00000474644 IGHV3-73A0A0B4J1V6 119 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 H3BNG1 76 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 CIDEAO60543 219 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 CRYBA4P53673 196 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 SLAQ13239 276 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 CT83Q5H943 113 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 SPANXN1Q5VSR9 72 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 SFRP2Q96HF1 295 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 SAMD10Q9BYL1 202 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
COL1A1-204ENST00000474644 RYR2Q92736 4967 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 A0A1W2PPQ1 181 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 PAX4O43316 350 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 NUDT3O95989 172 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 GATA1P15976 413 aaPredicted RBP10.98□□□□□ -0.65
COL1A1-204ENST00000474644 CTRLP40313 264 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 ZFP2Q6ZN57 461 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 GTSF1Q8WW33 167 aa10.98□□□□□ -0.65
COL1A1-204ENST00000474644 LINC00862A6NCI5 91 aa10.97□□□□□ -0.65
COL1A1-204ENST00000474644 SSTP61278 116 aa10.97□□□□□ -0.65
COL1A1-204ENST00000474644 LYZL1Q6UWQ5 148 aa10.97□□□□□ -0.65
COL1A1-204ENST00000474644 C15orf54Q8N8G6 183 aa10.97□□□□□ -0.65
COL1A1-204ENST00000474644 V9GYV3 84 aa10.97□□□□□ -0.65
COL1A1-204ENST00000474644 DNAH1Q9P2D7 4330 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 A0A087WWL8 130 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 A8MWL6 223 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 F2Z2F3 143 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 RHODO00212 210 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 CRYGDP07320 174 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms