RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 PSMG3Q9BT73 122 aaPredicted RBP16.55■□□□□ 0.24
PKD1-211ENST00000474088 EPDR1Q9UM22 224 aa16.55■□□□□ 0.24
PKD1-211ENST00000474088 FAT1Q14517 4588 aa16.55■□□□□ 0.24
PKD1-211ENST00000474088 RNASE3P12724 160 aaKnown RBP16.54■□□□□ 0.24
PKD1-211ENST00000474088 ZFP69Q49AA0 526 aa16.54■□□□□ 0.24
PKD1-211ENST00000474088 PRNTQ86SH4 94 aa16.54■□□□□ 0.24
PKD1-211ENST00000474088 ATP6V0CP27449 155 aa16.53■□□□□ 0.24
PKD1-211ENST00000474088 GGTLC3B5MD39 225 aa16.52■□□□□ 0.24
PKD1-211ENST00000474088 MBP02144 154 aa16.52■□□□□ 0.24
PKD1-211ENST00000474088 SERF2P84101 59 aa16.52■□□□□ 0.24
PKD1-211ENST00000474088 SAPCD1Q5SSQ6 148 aa16.52■□□□□ 0.24
PKD1-211ENST00000474088 CYB561D1Q8N8Q1 229 aa16.52■□□□□ 0.24
PKD1-211ENST00000474088 TMEM167BQ9NRX6 74 aa16.52■□□□□ 0.24
PKD1-211ENST00000474088 HERC1Q15751 4861 aa16.52■□□□□ 0.23
PKD1-211ENST00000474088 CXorf1O96002 111 aa16.51■□□□□ 0.23
PKD1-211ENST00000474088 LAGE3Q14657 143 aa16.51■□□□□ 0.23
PKD1-211ENST00000474088 Q6ZSN1 163 aa16.5■□□□□ 0.23
PKD1-211ENST00000474088 AQP10Q96PS8 301 aa16.5■□□□□ 0.23
PKD1-211ENST00000474088 ALG5Q9Y673 324 aa16.5■□□□□ 0.23
PKD1-211ENST00000474088 TM2D2Q9BX73 214 aa16.49■□□□□ 0.23
PKD1-211ENST00000474088 ACTR3CQ9C0K3 210 aaPredicted RBP16.49■□□□□ 0.23
PKD1-211ENST00000474088 PARLQ9H300 379 aa16.49■□□□□ 0.23
PKD1-211ENST00000474088 FAM30AQ9NZY2 134 aa16.49■□□□□ 0.23
PKD1-211ENST00000474088 TNFSF18Q9UNG2 199 aa16.49■□□□□ 0.23
PKD1-211ENST00000474088 IGKV3D-20A0A0C4DH25 116 aa16.48■□□□□ 0.23
PKD1-211ENST00000474088 ZFP2Q6ZN57 461 aa16.48■□□□□ 0.23
PKD1-211ENST00000474088 SH3BGRL3Q9H299 93 aa16.48■□□□□ 0.23
PKD1-211ENST00000474088 A8MWV9 139 aa16.47■□□□□ 0.23
PKD1-211ENST00000474088 PIK3CD-AS1Q5SR53 167 aa16.47■□□□□ 0.23
PKD1-211ENST00000474088 LINC00479Q96M42 142 aa16.47■□□□□ 0.23
PKD1-211ENST00000474088 A0A1W2PRE2 83 aa16.46■□□□□ 0.23
PKD1-211ENST00000474088 GAGE12JA6NER3 117 aa16.46■□□□□ 0.23
PKD1-211ENST00000474088 S100A4P26447 101 aaKnown RBP16.46■□□□□ 0.23
PKD1-211ENST00000474088 GAGE1Q13065 139 aa16.46■□□□□ 0.23
PKD1-211ENST00000474088 GAGE4Q13068 117 aa16.46■□□□□ 0.23
PKD1-211ENST00000474088 GAGE5Q13069 117 aa16.46■□□□□ 0.23
PKD1-211ENST00000474088 GAGE13Q4V321 117 aa16.46■□□□□ 0.23
PKD1-211ENST00000474088 Q8N3U1 123 aa16.46■□□□□ 0.23
PKD1-211ENST00000474088 TRAV34A0A0B4J273 112 aa16.45■□□□□ 0.22
PKD1-211ENST00000474088 FABP5P3A8MUU1 101 aa16.45■□□□□ 0.22
PKD1-211ENST00000474088 C1QBP02746 253 aa16.45■□□□□ 0.22
PKD1-211ENST00000474088 LINC00694P0DN24 101 aa16.45■□□□□ 0.22
PKD1-211ENST00000474088 LGALSLQ3ZCW2 172 aaPredicted RBP16.45■□□□□ 0.22
PKD1-211ENST00000474088 WFDC2Q14508 124 aa16.44■□□□□ 0.22
PKD1-211ENST00000474088 OR2T35Q8NGX2 323 aa16.44■□□□□ 0.22
PKD1-211ENST00000474088 ARL2-SNX15V9GYD0 113 aa16.44■□□□□ 0.22
PKD1-211ENST00000474088 TRAV8-3A0A0A6YYJ7 113 aa16.43■□□□□ 0.22
PKD1-211ENST00000474088 ASIPP42127 132 aa16.43■□□□□ 0.22
PKD1-211ENST00000474088 Q5BKY6 102 aa16.43■□□□□ 0.22
PKD1-211ENST00000474088 JPT2Q9H910 190 aa16.43■□□□□ 0.22
PKD1-211ENST00000474088 Q9UF83 564 aa16.43■□□□□ 0.22
PKD1-211ENST00000474088 UFSP1Q6NVU6 142 aa16.42■□□□□ 0.22
PKD1-211ENST00000474088 DAZ4Q86SG3 579 aaKnown RBP16.42■□□□□ 0.22
PKD1-211ENST00000474088 SAMD10Q9BYL1 202 aa16.42■□□□□ 0.22
PKD1-211ENST00000474088 MED28Q9H204 178 aa16.42■□□□□ 0.22
PKD1-211ENST00000474088 DAZ3Q9NR90 486 aaKnown RBP16.42■□□□□ 0.22
PKD1-211ENST00000474088 IL36BQ9NZH7 164 aa16.42■□□□□ 0.22
PKD1-211ENST00000474088 VPS13BQ7Z7G8 4022 aa16.41■□□□□ 0.22
PKD1-211ENST00000474088 IFNA7P01567 189 aa16.41■□□□□ 0.22
PKD1-211ENST00000474088 FGF8P55075 233 aaPredicted RBP16.41■□□□□ 0.22
PKD1-211ENST00000474088 A0A087WWC5 75 aa16.4■□□□□ 0.22
PKD1-211ENST00000474088 ZNF726P1Q15940 193 aa16.4■□□□□ 0.22
PKD1-211ENST00000474088 TOR2AQ5JU69 321 aa16.4■□□□□ 0.22
PKD1-211ENST00000474088 C14orf178Q8N769 122 aaPredicted RBP16.4■□□□□ 0.22
PKD1-211ENST00000474088 B4DEV8 164 aa16.39■□□□□ 0.21
PKD1-211ENST00000474088 DMRTA1Q5VZB9 504 aa16.39■□□□□ 0.21
PKD1-211ENST00000474088 RPL7L1Q6DKI1 246 aaKnown RBP16.39■□□□□ 0.21
PKD1-211ENST00000474088 DMBT1Q9UGM3 2413 aaPredicted RBP16.39■□□□□ 0.21
PKD1-211ENST00000474088 CTXND1A0A1B0GTU2 59 aa16.38■□□□□ 0.21
PKD1-211ENST00000474088 PEX7O00628 323 aa16.38■□□□□ 0.21
PKD1-211ENST00000474088 LECT2O14960 151 aa16.38■□□□□ 0.21
PKD1-211ENST00000474088 UBE2G2P60604 165 aa16.38■□□□□ 0.21
PKD1-211ENST00000474088 DNLZQ5SXM8 178 aa16.38■□□□□ 0.21
PKD1-211ENST00000474088 Q6ZSA8 131 aa16.38■□□□□ 0.21
PKD1-211ENST00000474088 H3BVH4 76 aa16.37■□□□□ 0.21
PKD1-211ENST00000474088 CRIP1P50238 77 aa16.37■□□□□ 0.21
PKD1-211ENST00000474088 Q86TA4 180 aa16.37■□□□□ 0.21
PKD1-211ENST00000474088 INO80EQ8NBZ0 244 aaPredicted RBP16.37■□□□□ 0.21
PKD1-211ENST00000474088 NKX6-2Q9C056 277 aaPredicted RBP16.37■□□□□ 0.21
PKD1-211ENST00000474088 SRRM2Q9UQ35 2752 aaKnown RBP16.37■□□□□ 0.21
PKD1-211ENST00000474088 BORCS7-ASMTA0A0B4J1R7 106 aa16.36■□□□□ 0.21
PKD1-211ENST00000474088 KRBOX1C9JBD0 128 aa16.36■□□□□ 0.21
PKD1-211ENST00000474088 RHODO00212 210 aa16.36■□□□□ 0.21
PKD1-211ENST00000474088 ARMS2P0C7Q2 107 aa16.36■□□□□ 0.21
PKD1-211ENST00000474088 SYT8Q8NBV8 401 aa16.36■□□□□ 0.21
PKD1-211ENST00000474088 HIST1H2BAQ96A08 127 aa16.36■□□□□ 0.21
PKD1-211ENST00000474088 COX11Q9Y6N1 276 aa16.36■□□□□ 0.21
PKD1-211ENST00000474088 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.35■□□□□ 0.21
PKD1-211ENST00000474088 RNF222A6NCQ9 220 aa16.35■□□□□ 0.21
PKD1-211ENST00000474088 FAM74A7A6NL05 159 aa16.35■□□□□ 0.21
PKD1-211ENST00000474088 GIPP09681 153 aaPredicted RBP16.35■□□□□ 0.21
PKD1-211ENST00000474088 BAALCQ8WXS3 180 aa16.35■□□□□ 0.21
PKD1-211ENST00000474088 ZC2HC1AQ96GY0 325 aa16.35■□□□□ 0.21
PKD1-211ENST00000474088 FLG2Q5D862 2391 aaPredicted RBP16.34■□□□□ 0.21
PKD1-211ENST00000474088 GRIFINA4D1Z8 144 aa16.34■□□□□ 0.21
PKD1-211ENST00000474088 M0R036 132 aa16.34■□□□□ 0.21
PKD1-211ENST00000474088 PTTG1O95997 202 aa16.34■□□□□ 0.21
PKD1-211ENST00000474088 PLA2G1BP04054 148 aaKnown RBP16.34■□□□□ 0.21
PKD1-211ENST00000474088 COX8CQ7Z4L0 72 aa16.34■□□□□ 0.21
PKD1-211ENST00000474088 OR11H4Q8NGC9 324 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms