RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 HIST1H1BP16401 226 aaKnown RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 ORM2P19652 201 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 CBLN1P23435 193 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 LGALS7P47929 136 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 UBE2E1P51965 193 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PRRX1P54821 245 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TCL1AP56279 114 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 BPIFB3P59826 476 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 DEFB1P60022 68 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PLP1P60201 277 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RAB5BP61020 215 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RHOBP62745 196 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 ERHP84090 104 aaKnown RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RHOGP84095 191 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RPL19P84098 196 aaKnown RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 HES1Q14469 280 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 FXYD3Q14802 87 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PLGLAQ15195 96 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 KLK9Q2XQG4 91 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PDZD11Q5EBL8 140 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PRR9Q5T870 116 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 C10orf113Q5VZT2 155 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 CLEC2AQ6UVW9 174 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 C10orf99Q6UWK7 81 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 UNQ9165/PRO28630Q6UXU0 137 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 LINC00322Q6ZN03 302 aaPredicted RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 LINC00305Q7Z4B0 112 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 GPHB5Q86YW7 130 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 OR8I2Q8N0Y5 310 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 HIST3H2BBQ8N257 126 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 EXOC3-AS1Q8N2X6 119 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TTC9CQ8N5M4 171 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 C14orf178Q8N769 122 aaPredicted RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 OR5T1Q8NG75 326 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 OR1L4Q8NGR5 311 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 OR4X1Q8NH49 305 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 SGMS2Q8NHU3 365 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 Q8TAT8 98 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF502Q8TBZ5 544 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 BLNKQ8WV28 456 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 CACNG8Q8WXS5 425 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 C22orf15Q8WYQ4 148 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 FRZBQ92765 325 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 ZC2HC1AQ96GY0 325 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 SFRP2Q96HF1 295 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 FAM210BQ96KR6 192 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 NOL4LQ96MY1 436 aaPredicted RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IMMP2LQ96T52 175 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 ATP6V0BQ99437 205 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PFDN5Q99471 154 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RNF5Q99942 180 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RASL11BQ9BPW5 248 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 SHANK2-AS3Q9BTD1 123 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 GPR61Q9BZJ8 451 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RNASE7Q9H1E1 156 aaKnown RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 OR51M1Q9H341 326 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 Q9H3A6 140 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM167BQ9NRX6 74 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF586Q9NXT0 402 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 C21orf62Q9NYP8 219 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 MRPL27Q9P0M9 148 aaKnown RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM14CQ9P0S9 112 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 LINC00527Q9UJ94 153 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 KLK9Q9UKQ9 250 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 RPH3ALQ9UNE2 315 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 HERC2O95714 4834 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TRBV19A0A075B6N1 114 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV3OR16-13A0A075B7E8 117 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV3-49A0A0A0MS15 119 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV3-74A0A0B4J1X5 117 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV41A0A0B4J266 112 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TRBV6-1A0A0K0K1D8 114 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 A0A1W2PPV4 95 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 A0A1W2PRE2 83 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SMIM27A0A1W2PRY6 76 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM213A2RRL7 107 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 XKRY2A2RUG3 117 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 GRIFINA4D1Z8 144 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF98A6NK75 572 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 NCBP2LA6PVI3 153 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF705FA8MVS1 300 aaPredicted RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 C1orf196B1AJZ1 125 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 B4DEV8 164 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF207O43670 478 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 GNG7O60262 68 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 NUPR1O60356 82 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SPINK4O60575 86 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 HYPMO75409 117 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 CNIH1O95406 144 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 GCGP01275 180 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 LTAP01374 205 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV3-11P01762 117 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IGHG2P01859 326 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TCRAP04437 139 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IGF1P05019 195 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SLC25A5P05141 298 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 CTSGP08311 255 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 NBEAP1P0C6P0 100 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SMIM6P0DI80 62 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms