RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MLST8Q9BVC4 326 aa13.08□□□□□ -0.32
PTCD3-210ENST00000473829 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.32
PTCD3-210ENST00000473829 HECTD4Q9Y4D8 3996 aa13.08□□□□□ -0.32
PTCD3-210ENST00000473829 GRIFINA4D1Z8 144 aa13.07□□□□□ -0.32
PTCD3-210ENST00000473829 TEX46H3BTG2 121 aa13.07□□□□□ -0.32
PTCD3-210ENST00000473829 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
PTCD3-210ENST00000473829 SLAQ13239 276 aa13.07□□□□□ -0.32
PTCD3-210ENST00000473829 PTH2Q96A98 100 aa13.07□□□□□ -0.32
PTCD3-210ENST00000473829 DNAH17Q9UFH2 4485 aa13.06□□□□□ -0.32
PTCD3-210ENST00000473829 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
PTCD3-210ENST00000473829 H3BVH4 76 aa13.06□□□□□ -0.32
PTCD3-210ENST00000473829 RS1O15537 224 aa13.06□□□□□ -0.32
PTCD3-210ENST00000473829 S100A4P26447 101 aaKnown RBP13.06□□□□□ -0.32
PTCD3-210ENST00000473829 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
PTCD3-210ENST00000473829 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
PTCD3-210ENST00000473829 CFAP126Q5VTH2 177 aa13.06□□□□□ -0.32
PTCD3-210ENST00000473829 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
PTCD3-210ENST00000473829 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
PTCD3-210ENST00000473829 RTL8CO15255 209 aa13.05□□□□□ -0.32
PTCD3-210ENST00000473829 BCL2P10415 239 aa13.05□□□□□ -0.32
PTCD3-210ENST00000473829 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
PTCD3-210ENST00000473829 DNLZQ5SXM8 178 aa13.05□□□□□ -0.32
PTCD3-210ENST00000473829 IL36BQ9NZH7 164 aa13.05□□□□□ -0.32
PTCD3-210ENST00000473829 MRPS16Q9Y3D3 137 aaKnown RBP13.05□□□□□ -0.32
PTCD3-210ENST00000473829 IGHV3-73A0A0B4J1V6 119 aa13.04□□□□□ -0.32
PTCD3-210ENST00000473829 K7EQD1 137 aa13.04□□□□□ -0.32
PTCD3-210ENST00000473829 GYPEP15421 78 aa13.04□□□□□ -0.32
PTCD3-210ENST00000473829 GATA1P15976 413 aaPredicted RBP13.04□□□□□ -0.32
PTCD3-210ENST00000473829 TXNDC17Q9BRA2 123 aa13.04□□□□□ -0.32
PTCD3-210ENST00000473829 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
PTCD3-210ENST00000473829 NBDYA0A0U1RRE5 68 aa13.03□□□□□ -0.32
PTCD3-210ENST00000473829 IFNA1P01562 189 aa13.03□□□□□ -0.32
PTCD3-210ENST00000473829 ARMS2P0C7Q2 107 aa13.03□□□□□ -0.32
PTCD3-210ENST00000473829 RPL19P84098 196 aaKnown RBP13.03□□□□□ -0.32
PTCD3-210ENST00000473829 MRPL23Q16540 153 aaKnown RBP13.03□□□□□ -0.32
PTCD3-210ENST00000473829 Q9H8V8 135 aa13.03□□□□□ -0.32
PTCD3-210ENST00000473829 CENPWQ5EE01 88 aa13.02□□□□□ -0.33
PTCD3-210ENST00000473829 PRR27Q6MZM9 219 aa13.02□□□□□ -0.33
PTCD3-210ENST00000473829 KRTAP1-5Q9BYS1 174 aa13.02□□□□□ -0.33
PTCD3-210ENST00000473829 JPT2Q9H910 190 aa13.02□□□□□ -0.33
PTCD3-210ENST00000473829 SCRT2Q9NQ03 307 aa13.02□□□□□ -0.33
PTCD3-210ENST00000473829 RAB19A4D1S5 217 aa13.01□□□□□ -0.33
PTCD3-210ENST00000473829 IGLV2-8P01709 118 aa13.01□□□□□ -0.33
PTCD3-210ENST00000473829 DMRTA1Q5VZB9 504 aa13.01□□□□□ -0.33
PTCD3-210ENST00000473829 SLC25A29Q8N8R3 303 aa13.01□□□□□ -0.33
PTCD3-210ENST00000473829 PARLQ9H300 379 aa13.01□□□□□ -0.33
PTCD3-210ENST00000473829 VAX2Q9UIW0 290 aa13.01□□□□□ -0.33
PTCD3-210ENST00000473829 PDE6DO43924 150 aa13□□□□□ -0.33
PTCD3-210ENST00000473829 SRIP30626 198 aa13□□□□□ -0.33
PTCD3-210ENST00000473829 PIK3CD-AS1Q5SR53 167 aa13□□□□□ -0.33
PTCD3-210ENST00000473829 LYPD5Q6UWN5 251 aa13□□□□□ -0.33
PTCD3-210ENST00000473829 Q6ZSN1 163 aa13□□□□□ -0.33
PTCD3-210ENST00000473829 NEGR1Q7Z3B1 354 aa13□□□□□ -0.33
PTCD3-210ENST00000473829 PCNPQ8WW12 178 aaKnown RBP13□□□□□ -0.33
PTCD3-210ENST00000473829 SAMD10Q9BYL1 202 aa13□□□□□ -0.33
PTCD3-210ENST00000473829 TRBV20OR9-2A0A075B6H5 130 aa12.99□□□□□ -0.33
PTCD3-210ENST00000473829 LYPD6BQ8NI32 183 aa12.99□□□□□ -0.33
PTCD3-210ENST00000473829 MED9Q9NWA0 146 aa12.99□□□□□ -0.33
PTCD3-210ENST00000473829 A8MWV9 139 aa12.98□□□□□ -0.33
PTCD3-210ENST00000473829 CIDEAO60543 219 aa12.98□□□□□ -0.33
PTCD3-210ENST00000473829 NXPH4O95158 308 aa12.98□□□□□ -0.33
PTCD3-210ENST00000473829 BLOC1S1P78537 153 aa12.98□□□□□ -0.33
PTCD3-210ENST00000473829 C1orf134Q5TEV5 83 aa12.98□□□□□ -0.33
PTCD3-210ENST00000473829 UFSP1Q6NVU6 142 aa12.98□□□□□ -0.33
PTCD3-210ENST00000473829 LINC00336Q6ZUF6 198 aa12.98□□□□□ -0.33
PTCD3-210ENST00000473829 TRBV6-4A0A1B0GX49 114 aa12.97□□□□□ -0.33
PTCD3-210ENST00000473829 CXCL1P09341 107 aa12.97□□□□□ -0.33
PTCD3-210ENST00000473829 PHLDA3Q9Y5J5 127 aa12.97□□□□□ -0.33
PTCD3-210ENST00000473829 PRSS29PA6NIE9 313 aa12.96□□□□□ -0.33
PTCD3-210ENST00000473829 M0R381 172 aa12.96□□□□□ -0.33
PTCD3-210ENST00000473829 MED14OSP0DP75 135 aa12.96□□□□□ -0.33
PTCD3-210ENST00000473829 MGST1P10620 155 aaKnown RBP12.96□□□□□ -0.33
PTCD3-210ENST00000473829 TAGLN2P37802 199 aaKnown RBP12.96□□□□□ -0.33
PTCD3-210ENST00000473829 GNG4P50150 75 aa12.96□□□□□ -0.33
PTCD3-210ENST00000473829 RHOHQ15669 191 aa12.96□□□□□ -0.33
PTCD3-210ENST00000473829 ZFP2Q6ZN57 461 aa12.96□□□□□ -0.33
PTCD3-210ENST00000473829 SYT8Q8NBV8 401 aa12.96□□□□□ -0.33
PTCD3-210ENST00000473829 PKHD1P08F94 4074 aa12.95□□□□□ -0.34
PTCD3-210ENST00000473829 PKD1P98161 4303 aa12.95□□□□□ -0.34
PTCD3-210ENST00000473829 A0A1B0GVY2 172 aa12.95□□□□□ -0.34
PTCD3-210ENST00000473829 OR10AG1Q8NH19 301 aa12.95□□□□□ -0.34
PTCD3-210ENST00000473829 C19orf71A6NCJ1 209 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 SIVA1O15304 175 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 TTC32Q5I0X7 151 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 ZFP82Q8N141 532 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 C6orf223Q8N319 242 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 SMIM12Q96EX1 92 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 SFRP2Q96HF1 295 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 PRADC1Q9BSG0 188 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 Q9UF83 564 aa12.94□□□□□ -0.34
PTCD3-210ENST00000473829 A0A087WWL8 130 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 MUC21A0A0G2JKD1 596 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 SNAI2O43623 268 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 SOHLH1Q5JUK2 328 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 FAM74A4Q5TZK3 123 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 WFDC10BQ8IUB3 73 aa12.93□□□□□ -0.34
PTCD3-210ENST00000473829 C14orf178Q8N769 122 aaPredicted RBP12.93□□□□□ -0.34
PTCD3-210ENST00000473829 SSBP4Q9BWG4 385 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms