RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 LILRA5A6NI73 299 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 BUB3O43684 328 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 CXCL13O43927 109 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 SH2D1AO60880 128 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 SCRG1O75711 98 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 PATE4P0C8F1 98 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 RHOHQ15669 191 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 Q6JHZ5 121 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 RNF182Q8N6D2 247 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 CD177Q8N6Q3 437 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 KLHL30-AS1Q8NEE0 82 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 CCL4L1Q8NHW4 92 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 DEC1Q9P2X7 70 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 SLC25A15Q9Y619 301 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 PCNTO95613 3336 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 GOLGB1Q14789 3259 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 IGHV1-45A0A0A0MS14 117 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 IQCF6A8MYZ5 107 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 C9orf139Q6ZV77 190 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 MSRB1Q9NZV6 116 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 WNT9BO14905 357 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 IGHG2P01859 326 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 TNFRSF4P43489 277 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 KRTAP21-3Q3LHN1 58 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 EEF1AKMT3Q96AZ1 226 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 KNTC1P50748 2209 aa3.85□□□□□ -1.79
TMEM39A-206ENST00000473684 IGHV3-43A0A0B4J1X8 118 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 A0A0J9YX75 114 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 C11orf86A6NJI1 115 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 IGHV3-43DP0DP04 118 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 ERCC8Q13216 396 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 FP248Q71RG6 208 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 TMEM105Q8N8V8 129 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 NRACQ8N912 160 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 KLF14Q8TD94 323 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 RETNQ9HD89 108 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 GNG12Q9UBI6 72 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 KIAA0100Q14667 2235 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 DEFB108AA8MXU0 73 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 M0R3E3 92 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 LGALS3P17931 250 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 RPL39P5Q59GN2 51 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 AMELXQ99217 191 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 SMIM2Q9BVW6 85 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 ABCA7Q8IZY2 2146 aa3.84□□□□□ -1.79
TMEM39A-206ENST00000473684 SDHAF1A6NFY7 115 aa3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 LIFP15018 202 aa3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 ATP5EP56381 51 aaPredicted RBP3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 FAM222AQ5U5X8 452 aa3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 MUSTN1Q8IVN3 82 aa3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 VSIG2Q96IQ7 327 aa3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 NDUFA4L2Q9NRX3 87 aa3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 PRRC2BQ5JSZ5 2229 aaKnown RBP3.84□□□□□ -1.8
TMEM39A-206ENST00000473684 TECTAO75443 2155 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 TRBV19A0A075B6N1 114 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV3-15A0A0B4J1V0 119 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 GAS8-AS1O95177 125 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 DLX1P56177 255 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 DEFB103AP81534 67 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 GGNQ86UU5 652 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 C17orf82Q86X59 251 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 SLC50A1Q9BRV3 221 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 TRAV26-2A0A0B4J265 109 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV1-69DA0A0B4J2H0 117 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 GATA1P15976 413 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 UBE2E1P51965 193 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 Q6ZRU5 148 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 PATE1Q8WXA2 126 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 CTSZQ9UBR2 303 aa3.83□□□□□ -1.8
TMEM39A-206ENST00000473684 TRANK1O15050 2925 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 TRAV8-3A0A0A6YYJ7 113 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 RBMY1BA6NDE4 496 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 RBMY1EA6NEQ0 496 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 H3BTX0 84 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 BCE1O60756 84 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 RBMY1DP0C7P1 496 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 RBMY1A1P0DJD3 496 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 RBMY1CP0DJD4 496 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 RBMY1FQ15415 496 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 PRR15Q8IV56 129 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 C14orf178Q8N769 122 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 NUP37Q8NFH4 326 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 IGLV4-69A0A075B6H9 119 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 VCYO14598 125 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 LEPROTO15243 131 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 TSPEAR-AS2P59090 65 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 PDE6HQ13956 83 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 ZNF491Q8N8L2 437 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 HTTP42858 3142 aa3.82□□□□□ -1.8
TMEM39A-206ENST00000473684 RP1P56715 2156 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 PRSS2P07478 247 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 GFRALQ6UXV0 394 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 DAZ4Q86SG3 579 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 WDR86Q86TI4 376 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 DYNAPQ8N1N2 210 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms