RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 C11orf21Q9P2W6 132 aa8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 FABP5P3A8MUU1 101 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 CIDEAO60543 219 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 PAGE4O60829 102 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 C1QBP02746 253 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 ORM1P02763 201 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 SFTA3P0C7M3 94 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 RAB5CP51148 216 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 TTC32Q5I0X7 151 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 OR4C5Q8NGB2 326 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 PTH2Q96A98 100 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 ZNF479Q96JC4 524 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 C9orf85Q96MD7 179 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 Q9H8V8 135 aa8.95□□□□□ -0.98
SHROOM3-204ENST00000473602 S100A9P06702 114 aaKnown RBP8.94□□□□□ -0.98
SHROOM3-204ENST00000473602 AKR1C3P42330 323 aa8.94□□□□□ -0.98
SHROOM3-204ENST00000473602 TNP2Q05952 138 aa8.94□□□□□ -0.98
SHROOM3-204ENST00000473602 IGKV3D-20A0A0C4DH25 116 aa8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 A0A1W2PPQ1 181 aa8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 C9JCJ5 164 aa8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 LTAP01374 205 aa8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 RNASE3P12724 160 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 ZNF876PQ49A33 203 aa8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 PIK3CD-AS1Q5SR53 167 aa8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 PCNPQ8WW12 178 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-204ENST00000473602 TRAV1-1A0A0B4J248 108 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 TEX46H3BTG2 121 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 BTF3P20290 206 aaKnown RBP8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 ASIPP42127 132 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 DNLZQ5SXM8 178 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 FAM162BQ5T6X4 162 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 Q8N1X5 172 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 C6orf223Q8N319 242 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 ZC2HC1AQ96GY0 325 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 MANBALQ9NQG1 85 aa8.92□□□□□ -0.98
SHROOM3-204ENST00000473602 A0A1B0GV50 99 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 K7EQD1 137 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 RS1O15537 224 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 GYPEP15421 78 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 SRIP30626 198 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 SULT1A2P50226 295 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 ZNF674Q2M3X9 581 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 SH2D6Q7Z4S9 175 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 SLC51BQ86UW2 128 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 TXNDC17Q9BRA2 123 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 SCRT2Q9NQ03 307 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 IL36BQ9NZH7 164 aa8.91□□□□□ -0.98
SHROOM3-204ENST00000473602 PGPEP1LA6NFU8 196 aa8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 B4DEV8 164 aa8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 SH2D1AO60880 128 aa8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 GATA1P15976 413 aaPredicted RBP8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 CRIP1P50238 77 aa8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 ZNF506Q5JVG8 444 aa8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 CFAP126Q5VTH2 177 aa8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 LYPD5Q6UWN5 251 aa8.9□□□□□ -0.98
SHROOM3-204ENST00000473602 TRBV6-4A0A1B0GX49 114 aa8.89□□□□□ -0.99
SHROOM3-204ENST00000473602 SCO2A0A1W2PP80 73 aa8.89□□□□□ -0.99
SHROOM3-204ENST00000473602 A8MWV9 139 aa8.89□□□□□ -0.99
SHROOM3-204ENST00000473602 KRBOX1C9JBD0 128 aa8.89□□□□□ -0.99
SHROOM3-204ENST00000473602 SIVA1O15304 175 aa8.89□□□□□ -0.99
SHROOM3-204ENST00000473602 LINC01559Q495D7 138 aa8.89□□□□□ -0.99
SHROOM3-204ENST00000473602 M0R036 132 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 NXPH4O95158 308 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 MGST1P10620 155 aaKnown RBP8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 RHOHQ15669 191 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 ZFP2Q6ZN57 461 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 SYT8Q8NBV8 401 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 C11orf52Q96A22 123 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 PRADC1Q9BSG0 188 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 MLST8Q9BVC4 326 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 GNG13Q9P2W3 67 aa8.88□□□□□ -0.99
SHROOM3-204ENST00000473602 H3BVH4 76 aa8.87□□□□□ -0.99
SHROOM3-204ENST00000473602 K7EP13 123 aa8.87□□□□□ -0.99
SHROOM3-204ENST00000473602 TIRAPP58753 221 aa8.87□□□□□ -0.99
SHROOM3-204ENST00000473602 BAGE2Q86Y30 109 aa8.87□□□□□ -0.99
SHROOM3-204ENST00000473602 SLC25A29Q8N8R3 303 aa8.87□□□□□ -0.99
SHROOM3-204ENST00000473602 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
SHROOM3-204ENST00000473602 IFNA1P01562 189 aa8.86□□□□□ -0.99
SHROOM3-204ENST00000473602 CXCL1P09341 107 aa8.86□□□□□ -0.99
SHROOM3-204ENST00000473602 ARMS2P0C7Q2 107 aa8.86□□□□□ -0.99
SHROOM3-204ENST00000473602 CCL20P78556 96 aa8.86□□□□□ -0.99
SHROOM3-204ENST00000473602 C9orf62Q8N4C0 152 aa8.86□□□□□ -0.99
SHROOM3-204ENST00000473602 NHLRC2Q8NBF2 726 aa8.86□□□□□ -0.99
SHROOM3-204ENST00000473602 PARLQ9H300 379 aa8.86□□□□□ -0.99
SHROOM3-204ENST00000473602 FAT1Q14517 4588 aa8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 LOC100131303A0A0U1RQF7 123 aa8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 RHODO00212 210 aa8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 PDE6DO43924 150 aa8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 TAGLN2P37802 199 aaKnown RBP8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 RPL35P42766 123 aaKnown RBP8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 MEF2BQ02080 365 aaPredicted RBP8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 SPATA12Q7Z6I5 190 aa8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 PHLDA3Q9Y5J5 127 aa8.85□□□□□ -0.99
SHROOM3-204ENST00000473602 TRAV9-2A0A087WT02 112 aa8.84□□□□□ -0.99
SHROOM3-204ENST00000473602 IGHV3-73A0A0B4J1V6 119 aa8.84□□□□□ -0.99
SHROOM3-204ENST00000473602 GRIFINA4D1Z8 144 aa8.84□□□□□ -0.99
SHROOM3-204ENST00000473602 ZFP82Q8N141 532 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms