RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 NBASA2RRP1 2371 aa10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 RNF223E7ERA6 249 aa10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 K7ENP7 123 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 GNRH2O43555 120 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 PSMB2P49721 201 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 TMEM219Q86XT9 240 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 KLHL30-AS1Q8NEE0 82 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 SPTBN1Q01082 2364 aaKnown RBP10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 TRAV41A0A0B4J266 112 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 A0A1B0GV72 72 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 ADORA2A-AS1P86434 159 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 C5orf56Q8N8D9 126 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 ATP6V0BQ99437 205 aa10.78□□□□□ -0.68
NHLRC3-204ENST00000473371 DUSP14O95147 198 aaKnown RBP10.77□□□□□ -0.68
NHLRC3-204ENST00000473371 RPL11P62913 178 aaKnown RBP10.77□□□□□ -0.68
NHLRC3-204ENST00000473371 PPP1R17O96001 155 aa10.77□□□□□ -0.69
NHLRC3-204ENST00000473371 NPFFO15130 113 aa10.77□□□□□ -0.69
NHLRC3-204ENST00000473371 EMP1P54849 157 aa10.77□□□□□ -0.69
NHLRC3-204ENST00000473371 CFAP126Q5VTH2 177 aa10.77□□□□□ -0.69
NHLRC3-204ENST00000473371 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
NHLRC3-204ENST00000473371 GPHB5Q86YW7 130 aa10.77□□□□□ -0.69
NHLRC3-204ENST00000473371 TSPAN13O95857 204 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 COX6B1P14854 86 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 UBE2D1P51668 147 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 FOXC1Q12948 553 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 FOXI1Q12951 378 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 DEFB104AQ8WTQ1 72 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 C1QTNF4Q9BXJ3 329 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 PTPRQQ9UMZ3 2332 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 IGKV3-7A0A075B6H7 116 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 F6UB75 175 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 MED14OSP0DP75 135 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 HERVK_113P61574 105 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
NHLRC3-204ENST00000473371 HRNRQ86YZ3 2850 aaPredicted RBP10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 C11orf86A6NJI1 115 aa10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 TRBV12-3P01733 135 aa10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 CRYGDP07320 174 aa10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 ZNF418Q8TF45 676 aaPredicted RBP10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 TP53TG1Q9Y2A0 90 aa10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 RNASE3P12724 160 aaKnown RBP10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 ZFP2Q6ZN57 461 aa10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 SYT8Q8NBV8 401 aa10.75□□□□□ -0.69
NHLRC3-204ENST00000473371 PTPRZ1P23471 2315 aaPredicted RBP10.74□□□□□ -0.69
NHLRC3-204ENST00000473371 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
NHLRC3-204ENST00000473371 SOCS3O14543 225 aa10.74□□□□□ -0.69
NHLRC3-204ENST00000473371 MOB4Q9Y3A3 225 aa10.74□□□□□ -0.69
NHLRC3-204ENST00000473371 PAPPA-AS1Q5QFB9 102 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 IGLV4-69A0A075B6H9 119 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 IGHV3OR16-10A0A075B7F0 116 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 IGHV1-69DA0A0B4J2H0 117 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 NDUFA4O00483 81 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 TSHBP01222 138 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 CKS1BP61024 79 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 LYRM7Q5U5X0 104 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 CD7P09564 240 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 PMVKQ15126 192 aa10.73□□□□□ -0.69
NHLRC3-204ENST00000473371 CEP295Q9C0D2 2601 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 A0A0J9YY99 117 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 A0A1W2PPR1 153 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 UBE2D3P61077 147 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 UBE2D2P62837 147 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 NFE4Q86UQ8 179 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 NDUFA11Q86Y39 141 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 FAM19A4Q96LR4 140 aa10.72□□□□□ -0.69
NHLRC3-204ENST00000473371 IGHV3-11P01762 117 aa10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 TMEM170BQ5T4T1 132 aa10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 PTH2Q96A98 100 aa10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 UBTD1Q9HAC8 227 aa10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 F5H697 171 aa10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 C19orf54Q5BKX5 351 aa10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
NHLRC3-204ENST00000473371 IGIPA6NJ69 53 aa10.71□□□□□ -0.7
NHLRC3-204ENST00000473371 LMO4P61968 165 aa10.71□□□□□ -0.7
NHLRC3-204ENST00000473371 POM121L12Q8N7R1 296 aa10.71□□□□□ -0.7
NHLRC3-204ENST00000473371 KIR2DL4Q99706 377 aa10.71□□□□□ -0.7
NHLRC3-204ENST00000473371 JPT2Q9H910 190 aa10.71□□□□□ -0.7
NHLRC3-204ENST00000473371 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.7
NHLRC3-204ENST00000473371 MUC4Q99102 2169 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 LINC00315P59091 139 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 TCTEX1D4Q5JR98 221 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 SUMO4Q6EEV6 95 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 RELNP78509 3460 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 IGHV4OR15-8A0A075B7B6 117 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 A0A087WW49 117 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 VCYO14598 125 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 Q6ZS46 218 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 APRG1Q8IVJ8 170 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 TMEM141Q96I45 108 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 CDIP1Q9H305 208 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 SVEP1Q4LDE5 3571 aa10.7□□□□□ -0.7
NHLRC3-204ENST00000473371 A0A087WWL8 130 aa10.69□□□□□ -0.7
NHLRC3-204ENST00000473371 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
NHLRC3-204ENST00000473371 FAM159AQ6UWV7 190 aa10.69□□□□□ -0.7
NHLRC3-204ENST00000473371 NXPH4O95158 308 aa10.69□□□□□ -0.7
NHLRC3-204ENST00000473371 TCL1BO95988 128 aa10.69□□□□□ -0.7
NHLRC3-204ENST00000473371 RPL32P62910 135 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms