RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 LINC00304Q8N9R0 145 aa2.05□□□□□ -2.08
CTSS-203ENST00000472977 TVP23CQ96ET8 276 aa2.05□□□□□ -2.08
CTSS-203ENST00000472977 KRTAP4-1Q9BYQ7 146 aa2.05□□□□□ -2.08
CTSS-203ENST00000472977 DIDO1Q9BTC0 2240 aaKnown RBP2.05□□□□□ -2.08
CTSS-203ENST00000472977 ZFHX2Q9C0A1 2572 aaPredicted RBP2.04□□□□□ -2.08
CTSS-203ENST00000472977 IGKV1D-17A0A075B6S4 117 aa2.04□□□□□ -2.08
CTSS-203ENST00000472977 IGKV2-24A0A0C4DH68 120 aa2.04□□□□□ -2.08
CTSS-203ENST00000472977 H3BRN7 92 aa2.04□□□□□ -2.08
CTSS-203ENST00000472977 SNCAP37840 140 aa2.04□□□□□ -2.08
CTSS-203ENST00000472977 UBA52P62987 128 aaKnown RBP2.04□□□□□ -2.08
CTSS-203ENST00000472977 SDK2Q58EX2 2172 aa2.04□□□□□ -2.08
CTSS-203ENST00000472977 LINC00052Q96N35 136 aa2.04□□□□□ -2.08
CTSS-203ENST00000472977 PRO1933Q9H354 126 aa2.04□□□□□ -2.08
CTSS-203ENST00000472977 HEATR1Q9H583 2144 aaKnown RBP2.03□□□□□ -2.08
CTSS-203ENST00000472977 MPDZO75970 2070 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 ARHGAP5Q13017 1502 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 MAGI1Q96QZ7 1491 aaPredicted RBP2.03□□□□□ -2.08
CTSS-203ENST00000472977 PIPP12273 146 aaPredicted RBP2.03□□□□□ -2.08
CTSS-203ENST00000472977 POLR2JP52435 117 aaKnown RBP2.03□□□□□ -2.08
CTSS-203ENST00000472977 SPANXN1Q5VSR9 72 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 SPTSSBQ8NFR3 76 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 C10orf82Q8WW14 230 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 TMEM141Q96I45 108 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 TTTY12Q9BZ98 90 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 DPH3P1Q9H4G8 78 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 Q9H521 79 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 FAIMQ9NVQ4 179 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 RP1P56715 2156 aa2.03□□□□□ -2.08
CTSS-203ENST00000472977 ARAP2Q8WZ64 1704 aa2.03□□□□□ -2.09
CTSS-203ENST00000472977 ADGRL2O95490 1459 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 FAM24AA6NFZ4 105 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 TMEM262E9PQX1 116 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 F8W1H4 67 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 CCL16O15467 120 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 RNASE2P10153 161 aaKnown RBP2.02□□□□□ -2.09
CTSS-203ENST00000472977 SLC48A1Q6P1K1 146 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 SBSPONQ8IVN8 264 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 PATE1Q8WXA2 126 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 LINC00474Q9P2X8 69 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 DOCK1Q14185 1865 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 SIP14410 1827 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 WNK3Q9BYP7 1800 aa2.02□□□□□ -2.09
CTSS-203ENST00000472977 DISP1Q96F81 1524 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 PTPRDP23468 1912 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 CPSF1Q10570 1443 aaKnown RBP2.01□□□□□ -2.09
CTSS-203ENST00000472977 CXorf51AA0A1B0GTR3 108 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 TCRBV3S1A0A5B6 114 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 RNASE3P12724 160 aaKnown RBP2.01□□□□□ -2.09
CTSS-203ENST00000472977 C15orf53Q8NAA6 179 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 ZNF431Q8TF32 576 aaPredicted RBP2.01□□□□□ -2.09
CTSS-203ENST00000472977 AQP10Q96PS8 301 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 TMEM106BQ9NUM4 274 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 LINC00312Q9Y6C7 94 aa2.01□□□□□ -2.09
CTSS-203ENST00000472977 TNRC6AQ8NDV7 1962 aaKnown RBP2.01□□□□□ -2.09
CTSS-203ENST00000472977 CASKIN1Q8WXD9 1431 aa2□□□□□ -2.09
CTSS-203ENST00000472977 LAMB1P07942 1786 aa2□□□□□ -2.09
CTSS-203ENST00000472977 CTTNBP2Q8WZ74 1663 aa2□□□□□ -2.09
CTSS-203ENST00000472977 RHOHQ15669 191 aa2□□□□□ -2.09
CTSS-203ENST00000472977 C9orf116Q5BN46 136 aaPredicted RBP2□□□□□ -2.09
CTSS-203ENST00000472977 UNQ5815/PRO19632Q6UWF5 114 aa2□□□□□ -2.09
CTSS-203ENST00000472977 LYPD5Q6UWN5 251 aa2□□□□□ -2.09
CTSS-203ENST00000472977 C5orf38Q86SI9 138 aa2□□□□□ -2.09
CTSS-203ENST00000472977 TXNDC17Q9BRA2 123 aa2□□□□□ -2.09
CTSS-203ENST00000472977 VAMP8Q9BV40 100 aa2□□□□□ -2.09
CTSS-203ENST00000472977 CDC42SE1Q9NRR8 79 aa2□□□□□ -2.09
CTSS-203ENST00000472977 ORMDL1Q9P0S3 153 aa2□□□□□ -2.09
CTSS-203ENST00000472977 V9GYS6 101 aa2□□□□□ -2.09
CTSS-203ENST00000472977 BAZ1AQ9NRL2 1556 aaPredicted RBP2□□□□□ -2.09
CTSS-203ENST00000472977 ABCC5O15440 1437 aa2□□□□□ -2.09
CTSS-203ENST00000472977 SHROOM3Q8TF72 1996 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 KDM5AP29375 1690 aaKnown RBP1.99□□□□□ -2.09
CTSS-203ENST00000472977 SHROOM2Q13796 1616 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 HIVEP2P31629 2446 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 PATJQ8NI35 1801 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 TMEM30CPA0ZSE6 113 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 COX7CP15954 63 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 SPRNQ5BIV9 151 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 C10orf55Q5SWW7 151 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 C12orf73Q69YU5 71 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 RPL7L1Q6DKI1 246 aaKnown RBP1.99□□□□□ -2.09
CTSS-203ENST00000472977 HCP5Q6MZN7 132 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 Q6ZRN7 208 aaPredicted RBP1.99□□□□□ -2.09
CTSS-203ENST00000472977 IFI27L1Q96BM0 104 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 REG4Q9BYZ8 158 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 DPY30Q9C005 99 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 MED14O60244 1454 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 MYH8P13535 1937 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 C10orf71Q711Q0 1435 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 FREM3P0C091 2139 aa1.99□□□□□ -2.09
CTSS-203ENST00000472977 CBLN1P23435 193 aa1.98□□□□□ -2.09
CTSS-203ENST00000472977 OR10AG1Q8NH19 301 aa1.98□□□□□ -2.09
CTSS-203ENST00000472977 TSLPQ969D9 159 aa1.98□□□□□ -2.09
CTSS-203ENST00000472977 ODF3Q96PU9 254 aa1.98□□□□□ -2.09
CTSS-203ENST00000472977 TOPAZ1Q8N9V7 1692 aa1.98□□□□□ -2.09
CTSS-203ENST00000472977 TROQ12816 1431 aaPredicted RBP1.98□□□□□ -2.09
CTSS-203ENST00000472977 PPIP5K1Q6PFW1 1433 aa1.98□□□□□ -2.09
CTSS-203ENST00000472977 PCDH15Q96QU1 1955 aa1.98□□□□□ -2.09
CTSS-203ENST00000472977 CHD1O14646 1710 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms