RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 C10orf99Q6UWK7 81 aa1.35□□□□□ -2.19
SGCE-210ENST00000472326 C11orf40Q8WZ69 217 aa1.35□□□□□ -2.19
SGCE-210ENST00000472326 H1FXQ92522 213 aaKnown RBP1.35□□□□□ -2.19
SGCE-210ENST00000472326 AP3S1Q92572 193 aa1.35□□□□□ -2.19
SGCE-210ENST00000472326 ZHX1-C8orf76Q96EF9 292 aa1.35□□□□□ -2.19
SGCE-210ENST00000472326 IMMP2LQ96T52 175 aa1.35□□□□□ -2.19
SGCE-210ENST00000472326 CCDC90BQ9GZT6 254 aa1.35□□□□□ -2.19
SGCE-210ENST00000472326 TVP23BQ9NYZ1 205 aa1.35□□□□□ -2.19
SGCE-210ENST00000472326 LPAP08519 4548 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 TRAV4A0A0B4J268 109 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 TRBV6-5A0A0K0K1A5 114 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 SLC22A1O15245 554 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 C1QBP02746 253 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 SSR2P43308 183 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 RPL28P46779 137 aaKnown RBP1.34□□□□□ -2.19
SGCE-210ENST00000472326 YPEL3P61236 119 aaPredicted RBP1.34□□□□□ -2.19
SGCE-210ENST00000472326 RPL19P84098 196 aaKnown RBP1.34□□□□□ -2.19
SGCE-210ENST00000472326 FAM173BQ6P4H8 233 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 Q6Q795 121 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 ZNF705AQ6ZN79 300 aaPredicted RBP1.34□□□□□ -2.19
SGCE-210ENST00000472326 PHF13Q86YI8 300 aaPredicted RBP1.34□□□□□ -2.19
SGCE-210ENST00000472326 UBE2DNLQ8IWF7 75 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 C15orf53Q8NAA6 179 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 OR52R1Q8NGF1 315 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 PFN4Q8NHR9 129 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 SCGB3A1Q96QR1 104 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 C8orf4Q9NR00 106 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 APLNQ9ULZ1 77 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 PYCARDQ9ULZ3 195 aa1.34□□□□□ -2.19
SGCE-210ENST00000472326 IGLV3-32A0A0A0MS00 114 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 TCL1BO95988 128 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 METTL15P1P0C7V9 234 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 HLA-DMBP28068 263 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 SERPINB9P50453 376 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 HAMPP81172 84 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 SPRNQ5BIV9 151 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 GOLT1AQ6ZVE7 132 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 AAED1Q7RTV5 226 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 TERB2Q8NHR7 220 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 OR4C12Q96R67 309 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 C11orf68Q9H3H3 251 aaKnown RBP1.33□□□□□ -2.2
SGCE-210ENST00000472326 CYSLTR1Q9Y271 337 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 TIMM22Q9Y584 194 aa1.33□□□□□ -2.2
SGCE-210ENST00000472326 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
SGCE-210ENST00000472326 hCG_1818297A0A087WSY0 165 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 IGKV2-40A0A087WW87 121 aaPredicted RBP1.32□□□□□ -2.2
SGCE-210ENST00000472326 IGKV3D-7A0A0C4DH55 119 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 IGKV3OR2-268A0A0C4DH90 116 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 TRAPPC13A5PLN9 417 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 MEIS3P1A6NDR6 274 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 A8MT66 165 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 TMEM238C9JI98 176 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 OR5F1O95221 314 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 IFNA21P01568 189 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 IFNA17P01571 189 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 IGKV2D-40P01614 121 aaPredicted RBP1.32□□□□□ -2.2
SGCE-210ENST00000472326 TFPTP0C1Z6 253 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 MPC1LP0DKB6 136 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 CDC42P60953 191 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 DYNLT1P63172 113 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 PSPHP78330 225 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 C3orf33Q6P1S2 294 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 MIR17HGQ75NE6 70 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 KTN1-AS1Q86SY8 53 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 PACRGLQ8N7B6 248 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.32□□□□□ -2.2
SGCE-210ENST00000472326 CEP19Q96LK0 163 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 PHB2Q99623 299 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 IMUPQ9GZP8 106 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 SH3BGRL3Q9H299 93 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 TMEM133Q9H2Q1 129 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 VCX3BQ9H321 246 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 OPTCQ9UBM4 332 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 TP73-AS1Q9UF72 201 aa1.32□□□□□ -2.2
SGCE-210ENST00000472326 FAM32AQ9Y421 112 aaKnown RBP1.32□□□□□ -2.2
SGCE-210ENST00000472326 BUB1B-PAK6H3BSN5 160 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 H3BT86 120 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 AIPO00170 330 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 ATG12O94817 140 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 IFNA1P01562 189 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 IFNA7P01567 189 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 SPI1P17947 270 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 GPX2P18283 190 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 RPS4Y1P22090 263 aaKnown RBP1.31□□□□□ -2.2
SGCE-210ENST00000472326 RPS3P23396 243 aaKnown RBP eCLIP1.31□□□□□ -2.2
SGCE-210ENST00000472326 ERP29P30040 261 aaKnown RBP1.31□□□□□ -2.2
SGCE-210ENST00000472326 LYRM7Q5U5X0 104 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 FAM27BQ5VT28 67 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 HACD4Q5VWC8 232 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 PPP1R2P3Q6NXS1 205 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 TRAPPC6BQ86SZ2 158 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 STX12Q86Y82 276 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 LINC00301Q8NCQ3 95 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 SLC30A7Q8NEW0 376 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 OR51T1Q8NGJ9 327 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 C10orf82Q8WW14 230 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 DGCR14Q96DF8 476 aaKnown RBP1.31□□□□□ -2.2
SGCE-210ENST00000472326 TMEM70Q9BUB7 260 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 ENY2Q9NPA8 101 aa1.31□□□□□ -2.2
SGCE-210ENST00000472326 UQCC1Q9NVA1 299 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms