RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 IGKCP01834 107 aa13.17□□□□□ -0.3
RRP1-202ENST00000471909 RPL24P83731 157 aaKnown RBP13.17□□□□□ -0.3
RRP1-202ENST00000471909 LRRC75A-AS1Q8N1F1 130 aa13.17□□□□□ -0.3
RRP1-202ENST00000471909 APCP25054 2843 aa13.17□□□□□ -0.3
RRP1-202ENST00000471909 TNFRSF6BO95407 300 aa13.17□□□□□ -0.3
RRP1-202ENST00000471909 SOCS3O14543 225 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 GAS8-AS1O95177 125 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 EVI2AP22794 236 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 LINC01559Q495D7 138 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 CNFNQ9BYD5 112 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 K7ERJ3 54 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 Q6YL49 198 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 FOXC2Q99958 501 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 VPREB3Q9UKI3 123 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 CR1P17927 2039 aa13.16□□□□□ -0.3
RRP1-202ENST00000471909 NBPF19A0A087WUL8 3843 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 IGHV7-4-1A0A0J9YVY3 117 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 Q96MF0 132 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 RHPN1-AS1Q9BWJ2 59 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 DAZ1Q9NQZ3 744 aaKnown RBP13.15□□□□□ -0.3
RRP1-202ENST00000471909 C11orf21Q9P2W6 132 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 CREBBPQ92793 2442 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 TRBV25-1A0A075B6N4 114 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 DPM2O94777 84 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 SMPXQ9UHP9 88 aa13.15□□□□□ -0.3
RRP1-202ENST00000471909 IGKV3D-20A0A0C4DH25 116 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 ATP5LO75964 103 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 TMEM158Q8WZ71 300 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 EDN2P20800 178 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
RRP1-202ENST00000471909 ZC2HC1BQ5TFG8 222 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 KRTAP1-3Q8IUG1 177 aa13.14□□□□□ -0.31
RRP1-202ENST00000471909 NHP2Q9NX24 153 aaKnown RBP13.14□□□□□ -0.31
RRP1-202ENST00000471909 Q6ZQT7 251 aa13.13□□□□□ -0.31
RRP1-202ENST00000471909 CEND1Q8N111 149 aa13.13□□□□□ -0.31
RRP1-202ENST00000471909 PHLDA1Q8WV24 401 aaPredicted RBP13.13□□□□□ -0.31
RRP1-202ENST00000471909 TENM4Q6N022 2769 aa13.13□□□□□ -0.31
RRP1-202ENST00000471909 IGKV3-7A0A075B6H7 116 aa13.12□□□□□ -0.31
RRP1-202ENST00000471909 GATA1P15976 413 aaPredicted RBP13.12□□□□□ -0.31
RRP1-202ENST00000471909 DEFB1P60022 68 aa13.12□□□□□ -0.31
RRP1-202ENST00000471909 TM2D2Q9BX73 214 aa13.12□□□□□ -0.31
RRP1-202ENST00000471909 ZNF469Q96JG9 3925 aaPredicted RBP13.12□□□□□ -0.31
RRP1-202ENST00000471909 HOXA3O43365 443 aaPredicted RBP13.12□□□□□ -0.31
RRP1-202ENST00000471909 Q8N8P6 123 aa13.12□□□□□ -0.31
RRP1-202ENST00000471909 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 HLA-DRB4P13762 266 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 PRR9Q5T870 116 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 TMEM160Q9NX00 188 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 HLA-DRB4X5D2U9 266 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 CHD6Q8TD26 2715 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 K7EMT4 169 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 CLUHP3Q96NS8 147 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
RRP1-202ENST00000471909 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
RRP1-202ENST00000471909 LENEPQ9Y5L5 61 aa13.1□□□□□ -0.31
RRP1-202ENST00000471909 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
RRP1-202ENST00000471909 A6NJY4 79 aa13.09□□□□□ -0.31
RRP1-202ENST00000471909 OVOL1O14753 267 aa13.09□□□□□ -0.31
RRP1-202ENST00000471909 SRD5A1P18405 259 aa13.09□□□□□ -0.31
RRP1-202ENST00000471909 OR10J6PQ8NGY7 276 aa13.09□□□□□ -0.31
RRP1-202ENST00000471909 E9PLD3 99 aa13.09□□□□□ -0.31
RRP1-202ENST00000471909 MRPL35Q9NZE8 188 aaKnown RBP13.09□□□□□ -0.31
RRP1-202ENST00000471909 IGLV2-18A0A075B6J9 118 aa13.08□□□□□ -0.32
RRP1-202ENST00000471909 F6UB75 175 aa13.08□□□□□ -0.32
RRP1-202ENST00000471909 MYOZ3Q8TDC0 251 aa13.08□□□□□ -0.32
RRP1-202ENST00000471909 ZFAND2AQ8N6M9 145 aa13.08□□□□□ -0.32
RRP1-202ENST00000471909 IGLL5B9A064 214 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 J3KRW8 73 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 K7EMI3 77 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 ZNF479Q96JC4 524 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 UFC1Q9Y3C8 167 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 F8W1H4 67 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 LAGE3Q14657 143 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 HIST2H2BCQ6DN03 193 aa13.07□□□□□ -0.32
RRP1-202ENST00000471909 TAL2Q16559 108 aa13.06□□□□□ -0.32
RRP1-202ENST00000471909 FOXI2Q6ZQN5 318 aa13.06□□□□□ -0.32
RRP1-202ENST00000471909 DUX5Q96PT3 197 aa13.06□□□□□ -0.32
RRP1-202ENST00000471909 DOPEY2Q9Y3R5 2298 aa13.06□□□□□ -0.32
RRP1-202ENST00000471909 J3QR89 54 aa13.06□□□□□ -0.32
RRP1-202ENST00000471909 MAPKAPK5-AS1Q8N8E1 139 aa13.06□□□□□ -0.32
RRP1-202ENST00000471909 ELANEP08246 267 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 DCANP1Q8TF63 244 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 FAM19A4Q96LR4 140 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 SIGMAR1Q99720 223 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 GTSF1LQ9H1H1 148 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 A0A087WX48 190 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 AZU1P20160 251 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 WFDC2Q14508 124 aa13.05□□□□□ -0.32
RRP1-202ENST00000471909 SPANXB1Q9NS25 103 aaPredicted RBP13.05□□□□□ -0.32
RRP1-202ENST00000471909 LGALS1P09382 135 aaKnown RBP13.04□□□□□ -0.32
RRP1-202ENST00000471909 C12orf74Q32Q52 190 aa13.04□□□□□ -0.32
RRP1-202ENST00000471909 WFDC11Q8NEX6 87 aa13.04□□□□□ -0.32
RRP1-202ENST00000471909 HIST1H4GQ99525 98 aa13.04□□□□□ -0.32
RRP1-202ENST00000471909 ITPR3Q14573 2671 aa13.04□□□□□ -0.32
RRP1-202ENST00000471909 AGRNO00468 2067 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms