RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ZNF876PQ49A33 203 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 ZNF506Q5JVG8 444 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 PQLC2Q6ZP29 291 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 OR2G3Q8NGZ4 309 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 C9orf85Q96MD7 179 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 Q9HAA7 133 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 EPDR1Q9UM22 224 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 EPM2AB3EWF7 344 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 DEFA1P59665 94 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 DEFA3P59666 94 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 ERVFC1-1P60608 527 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 FLI1Q01543 452 aaPredicted RBP5.38□□□□□ -1.55
USP48-207ENST00000471752 UFSP1Q6NVU6 142 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 C14orf178Q8N769 122 aaPredicted RBP5.38□□□□□ -1.55
USP48-207ENST00000471752 OR2T35Q8NGX2 323 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 AQP10Q96PS8 301 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 SSBP4Q9BWG4 385 aaPredicted RBP5.38□□□□□ -1.55
USP48-207ENST00000471752 SDF2L1Q9HCN8 221 aa5.38□□□□□ -1.55
USP48-207ENST00000471752 IGHV3-38A0A0C4DH36 116 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 GRIFINA4D1Z8 144 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 GAGE12JA6NER3 117 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 FBLL1A6NHQ2 334 aaKnown RBP5.37□□□□□ -1.55
USP48-207ENST00000471752 IBA57-AS1B1ANH7 110 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 LECT2O14960 151 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 ORM1P02763 201 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 PET100P0DJ07 73 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 INAFM2P0DMQ5 153 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 EVI2AP22794 236 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 GCSHP23434 173 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 FHITP49789 147 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 GAGE1Q13065 139 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 GAGE4Q13068 117 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 GAGE5Q13069 117 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 LINC01620Q4KN68 170 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 GAGE13Q4V321 117 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 Q5VSD8 79 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 C5orf17Q8NAS9 161 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 PCNPQ8WW12 178 aaKnown RBP5.37□□□□□ -1.55
USP48-207ENST00000471752 MED28Q9H204 178 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 CYTL1Q9NRR1 136 aa5.37□□□□□ -1.55
USP48-207ENST00000471752 TRAV9-2A0A087WT02 112 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 TAAR5O14804 337 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 PFN1P07737 140 aaKnown RBP5.36□□□□□ -1.55
USP48-207ENST00000471752 LINC01556Q5JQF7 62 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 OR10J3Q5JRS4 329 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 DAZ4Q86SG3 579 aaKnown RBP5.36□□□□□ -1.55
USP48-207ENST00000471752 NFE4Q86UQ8 179 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 ARL6IP6Q8N6S5 226 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 ZC2HC1AQ96GY0 325 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 KCNS1Q96KK3 526 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 TXNDC17Q9BRA2 123 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 PSMG3Q9BT73 122 aaPredicted RBP5.36□□□□□ -1.55
USP48-207ENST00000471752 DAZ3Q9NR90 486 aaKnown RBP5.36□□□□□ -1.55
USP48-207ENST00000471752 ARL2-SNX15V9GYD0 113 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 UBR4Q5T4S7 5183 aa5.36□□□□□ -1.55
USP48-207ENST00000471752 FXYD6-FXYD2A0A087WZ82 144 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 TMSB15BA0A087X1C1 80 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 FAM74A7A6NL05 159 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 M0R036 132 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 CXorf1O96002 111 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 LINC00694P0DN24 101 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 PPT1P50897 306 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 TIRAPP58753 221 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 SMUG1Q53HV7 270 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 FAM74A1Q5RGS3 127 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 CYB561D1Q8N8Q1 229 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 ATP6V0E2Q8NHE4 81 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 ACTR3CQ9C0K3 210 aaPredicted RBP5.35□□□□□ -1.55
USP48-207ENST00000471752 GTSF1LQ9H1H1 148 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 PARLQ9H300 379 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 TNFSF18Q9UNG2 199 aa5.35□□□□□ -1.55
USP48-207ENST00000471752 A0A087WWL8 130 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 IGLV5-52A0A0A0MRZ9 124 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 TRBV6-4A0A1B0GX49 114 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 KRBOX1C9JBD0 128 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 H3BVH4 76 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 EREGO14944 169 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 ARMS2P0C7Q2 107 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 SERF2P84101 59 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 LGALSLQ3ZCW2 172 aaPredicted RBP5.34□□□□□ -1.55
USP48-207ENST00000471752 LELP1Q5T871 98 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 Q8N814 137 aa5.34□□□□□ -1.55
USP48-207ENST00000471752 MUC21A0A0G2JKD1 596 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 MUC21A0A140T8X8 626 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 A0A1B0GV50 99 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 A0A1W2PRE2 83 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 PEX7O00628 323 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 SH2D1AO60880 128 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 PTTG1O95997 202 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 IFNA7P01567 189 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 GIPP09681 153 aaPredicted RBP5.33□□□□□ -1.56
USP48-207ENST00000471752 RPL19P84098 196 aaKnown RBP5.33□□□□□ -1.56
USP48-207ENST00000471752 RHOHQ15669 191 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 CDPF1Q6NVV7 123 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 Q86TA4 180 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 OR11H4Q8NGC9 324 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 BAALCQ8WXS3 180 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 PTH2Q96A98 100 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms