RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SRD5A1P18405 259 aa7.96□□□□□ -1.14
APLF-204ENST00000471727 FOXI2Q6ZQN5 318 aa7.96□□□□□ -1.14
APLF-204ENST00000471727 TOMM6Q96B49 74 aa7.96□□□□□ -1.14
APLF-204ENST00000471727 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
APLF-204ENST00000471727 H7C1H1 209 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 HOXA3O43365 443 aaPredicted RBP7.95□□□□□ -1.14
APLF-204ENST00000471727 MGPP08493 103 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 NPSP0C0P6 89 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
APLF-204ENST00000471727 CDKN1BP46527 198 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 PTTG1IPP53801 180 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 SYNJ2BPP57105 145 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 DEFB1P60022 68 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 HHLA3Q9XRX5 114 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 KIF25-AS1Q9Y6Z4 181 aa7.95□□□□□ -1.14
APLF-204ENST00000471727 USP9XQ93008 2570 aaPredicted RBP7.94□□□□□ -1.14
APLF-204ENST00000471727 ACACBO00763 2458 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 SPG11Q96JI7 2443 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 TAX1BP3O14907 124 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 CD7P09564 240 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 C10orf99Q6UWK7 81 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 MAPK1IP1LQ8NDC0 245 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 C9orf85Q96MD7 179 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 SCGB3A1Q96QR1 104 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 PEMTQ9UBM1 199 aa7.94□□□□□ -1.14
APLF-204ENST00000471727 TRGV11A0A075B6L2 103 aa7.93□□□□□ -1.14
APLF-204ENST00000471727 IGHV1OR15-1A0A075B7D0 117 aa7.93□□□□□ -1.14
APLF-204ENST00000471727 TRAV12-3A0A0B4J271 114 aa7.93□□□□□ -1.14
APLF-204ENST00000471727 NMUP48645 174 aa7.93□□□□□ -1.14
APLF-204ENST00000471727 IGHV3-16A0A0C4DH30 117 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 TRBV6-5A0A0K0K1A5 114 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 F8VRH5 84 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 LINC01619G3V211 115 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 H3BRM9 83 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 VCYO14598 125 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 EDN2P20800 178 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 LINC00315P59091 139 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 VAMP3Q15836 100 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 TCTEX1D4Q5JR98 221 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 ZC2HC1BQ5TFG8 222 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 ERASQ7Z444 233 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 Q96MF0 132 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
APLF-204ENST00000471727 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
APLF-204ENST00000471727 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
APLF-204ENST00000471727 PAPPA-AS1Q5QFB9 102 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 ADAMTSL5Q6ZMM2 481 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 C4orf3Q8WVX3 66 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 CSTL1Q9H114 145 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 TMEM160Q9NX00 188 aa7.92□□□□□ -1.14
APLF-204ENST00000471727 A8MTW9 85 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 KRTAP10-9P60411 292 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 TAL2Q16559 108 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 C2orf66Q6UXQ4 117 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 RPL39LQ96EH5 51 aaKnown RBP7.91□□□□□ -1.14
APLF-204ENST00000471727 TMEM141Q96I45 108 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 KIR2DL4Q99706 377 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 TP73-AS1Q9UF72 201 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
APLF-204ENST00000471727 CHTOPQ9Y3Y2 248 aaKnown RBP7.91□□□□□ -1.14
APLF-204ENST00000471727 SUMO4Q6EEV6 95 aa7.9□□□□□ -1.14
APLF-204ENST00000471727 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
APLF-204ENST00000471727 TRBV27A0A0K0K1C4 114 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 CBY3A6NI87 242 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 CCL25O15444 150 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 PIK3CD-AS1Q5SR53 167 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 AMTNQ6UX39 209 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 GTSCR1Q86UQ5 136 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 DUX5Q96PT3 197 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 FLNCQ14315 2725 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 PRRC2AP48634 2157 aaKnown RBP7.89□□□□□ -1.15
APLF-204ENST00000471727 MYO18BQ8IUG5 2567 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 F5H697 171 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 FOSL1P15407 271 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 RIPPLY3P57055 190 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 TRPT1Q86TN4 253 aaKnown RBP7.89□□□□□ -1.15
APLF-204ENST00000471727 Q8N1Y9 231 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 OR4C5Q8NGB2 326 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 PTH2Q96A98 100 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 JMJD8Q96S16 334 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 TIMM17AQ99595 171 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 EDA2RQ9HAV5 297 aa7.89□□□□□ -1.15
APLF-204ENST00000471727 ZNF256Q9Y2P7 627 aaPredicted RBP7.89□□□□□ -1.15
APLF-204ENST00000471727 COL12A1Q99715 3063 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 CSPG4Q6UVK1 2322 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 C9orf118A6NHY6 69 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 SPRY2O43597 315 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 RHOHQ15669 191 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 SPINK13Q1W4C9 94 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 ZFP2Q6ZN57 461 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 BAALCQ8WXS3 180 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 SELENOKQ9Y6D0 94 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 CSMD1Q96PZ7 3565 aa7.88□□□□□ -1.15
APLF-204ENST00000471727 TRBV25-1A0A075B6N4 114 aa7.87□□□□□ -1.15
APLF-204ENST00000471727 TRAV12-2A0A075B6T6 113 aa7.87□□□□□ -1.15
APLF-204ENST00000471727 IGKV2D-26A0A0A0MRZ7 120 aa7.87□□□□□ -1.15
APLF-204ENST00000471727 TRAV25A0A0B4J276 109 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms