RNA–Protein interactions for RNA: ENST00000471526.1

SHQ1-206, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 4

Gene SHQ1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-206ENST00000471526 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
SHQ1-206ENST00000471526 MGST1P10620 155 aaKnown RBP12.85□□□□□ -0.35
SHQ1-206ENST00000471526 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
SHQ1-206ENST00000471526 ATP6V0CP27449 155 aa12.85□□□□□ -0.35
SHQ1-206ENST00000471526 TMEM70Q9BUB7 260 aa12.85□□□□□ -0.35
SHQ1-206ENST00000471526 HERC1Q15751 4861 aa12.85□□□□□ -0.35
SHQ1-206ENST00000471526 GGTLC3B5MD39 225 aa12.84□□□□□ -0.35
SHQ1-206ENST00000471526 CYB561D1Q8N8Q1 229 aa12.84□□□□□ -0.35
SHQ1-206ENST00000471526 PTH2Q96A98 100 aa12.84□□□□□ -0.35
SHQ1-206ENST00000471526 PSMG3Q9BT73 122 aaPredicted RBP12.84□□□□□ -0.35
SHQ1-206ENST00000471526 TMEM167BQ9NRX6 74 aa12.84□□□□□ -0.35
SHQ1-206ENST00000471526 ALG5Q9Y673 324 aa12.84□□□□□ -0.35
SHQ1-206ENST00000471526 CXorf1O96002 111 aa12.83□□□□□ -0.36
SHQ1-206ENST00000471526 MBP02144 154 aa12.83□□□□□ -0.36
SHQ1-206ENST00000471526 S100A4P26447 101 aaKnown RBP12.83□□□□□ -0.36
SHQ1-206ENST00000471526 Q6ZSN1 163 aa12.83□□□□□ -0.36
SHQ1-206ENST00000471526 ACTR3CQ9C0K3 210 aaPredicted RBP12.83□□□□□ -0.36
SHQ1-206ENST00000471526 TRAV34A0A0B4J273 112 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 SERF2P84101 59 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 GAGE1Q13065 139 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 GAGE4Q13068 117 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 GAGE5Q13069 117 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 LGALSLQ3ZCW2 172 aaPredicted RBP12.82□□□□□ -0.36
SHQ1-206ENST00000471526 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 SAPCD1Q5SSQ6 148 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 Q8N3U1 123 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 LINC00479Q96M42 142 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 TM2D2Q9BX73 214 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 SH3BGRL3Q9H299 93 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 FAM30AQ9NZY2 134 aa12.82□□□□□ -0.36
SHQ1-206ENST00000471526 IGKV3D-20A0A0C4DH25 116 aa12.81□□□□□ -0.36
SHQ1-206ENST00000471526 OR2T35Q8NGX2 323 aa12.81□□□□□ -0.36
SHQ1-206ENST00000471526 AQP10Q96PS8 301 aa12.81□□□□□ -0.36
SHQ1-206ENST00000471526 PARLQ9H300 379 aa12.81□□□□□ -0.36
SHQ1-206ENST00000471526 LAGE3Q14657 143 aa12.8□□□□□ -0.36
SHQ1-206ENST00000471526 TNFSF18Q9UNG2 199 aa12.8□□□□□ -0.36
SHQ1-206ENST00000471526 A8MWV9 139 aa12.79□□□□□ -0.36
SHQ1-206ENST00000471526 IFNA7P01567 189 aa12.79□□□□□ -0.36
SHQ1-206ENST00000471526 WFDC2Q14508 124 aa12.79□□□□□ -0.36
SHQ1-206ENST00000471526 JPT2Q9H910 190 aa12.79□□□□□ -0.36
SHQ1-206ENST00000471526 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 LECT2O14960 151 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 ASIPP42127 132 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 Q5BKY6 102 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 ZFP2Q6ZN57 461 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 DAZ4Q86SG3 579 aaKnown RBP12.78□□□□□ -0.36
SHQ1-206ENST00000471526 MED28Q9H204 178 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 DAZ3Q9NR90 486 aaKnown RBP12.78□□□□□ -0.36
SHQ1-206ENST00000471526 Q9UF83 564 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 VPS13BQ7Z7G8 4022 aa12.78□□□□□ -0.36
SHQ1-206ENST00000471526 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.37
SHQ1-206ENST00000471526 A0A1W2PRE2 83 aa12.77□□□□□ -0.37
SHQ1-206ENST00000471526 UBE2G2P60604 165 aa12.77□□□□□ -0.37
SHQ1-206ENST00000471526 SAMD10Q9BYL1 202 aa12.77□□□□□ -0.37
SHQ1-206ENST00000471526 DMBT1Q9UGM3 2413 aaPredicted RBP12.77□□□□□ -0.37
SHQ1-206ENST00000471526 RPL7L1Q6DKI1 246 aaKnown RBP12.76□□□□□ -0.37
SHQ1-206ENST00000471526 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
SHQ1-206ENST00000471526 B4DEV8 164 aa12.75□□□□□ -0.37
SHQ1-206ENST00000471526 LINC00694P0DN24 101 aa12.75□□□□□ -0.37
SHQ1-206ENST00000471526 ZNF726P1Q15940 193 aa12.75□□□□□ -0.37
SHQ1-206ENST00000471526 PIK3CD-AS1Q5SR53 167 aa12.75□□□□□ -0.37
SHQ1-206ENST00000471526 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
SHQ1-206ENST00000471526 BATF3Q9NR55 127 aa12.75□□□□□ -0.37
SHQ1-206ENST00000471526 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
SHQ1-206ENST00000471526 FLG2Q5D862 2391 aaPredicted RBP12.74□□□□□ -0.37
SHQ1-206ENST00000471526 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.74□□□□□ -0.37
SHQ1-206ENST00000471526 H3BVH4 76 aa12.74□□□□□ -0.37
SHQ1-206ENST00000471526 PEX7O00628 323 aa12.74□□□□□ -0.37
SHQ1-206ENST00000471526 C1QBP02746 253 aa12.74□□□□□ -0.37
SHQ1-206ENST00000471526 FGF8P55075 233 aaPredicted RBP12.74□□□□□ -0.37
SHQ1-206ENST00000471526 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
SHQ1-206ENST00000471526 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
SHQ1-206ENST00000471526 INO80EQ8NBZ0 244 aaPredicted RBP12.74□□□□□ -0.37
SHQ1-206ENST00000471526 BAALCQ8WXS3 180 aa12.74□□□□□ -0.37
SHQ1-206ENST00000471526 A0A087WWC5 75 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 CTXND1A0A1B0GTU2 59 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 GRIFINA4D1Z8 144 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 M0R036 132 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 ARMS2P0C7Q2 107 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 Q86TA4 180 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 SYT8Q8NBV8 401 aa12.73□□□□□ -0.37
SHQ1-206ENST00000471526 CRIP1P50238 77 aa12.72□□□□□ -0.37
SHQ1-206ENST00000471526 FAM74A4Q5TZK3 123 aa12.72□□□□□ -0.37
SHQ1-206ENST00000471526 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
SHQ1-206ENST00000471526 FXYD6-FXYD2A0A087WZ82 144 aa12.71□□□□□ -0.37
SHQ1-206ENST00000471526 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
SHQ1-206ENST00000471526 J3QL48 77 aa12.71□□□□□ -0.37
SHQ1-206ENST00000471526 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.37
SHQ1-206ENST00000471526 ZC2HC1AQ96GY0 325 aa12.71□□□□□ -0.37
SHQ1-206ENST00000471526 SRRM2Q9UQ35 2752 aaKnown RBP12.71□□□□□ -0.38
SHQ1-206ENST00000471526 MYCBP2O75592 4640 aa12.71□□□□□ -0.38
SHQ1-206ENST00000471526 A0A087WWL8 130 aa12.7□□□□□ -0.38
SHQ1-206ENST00000471526 RNF222A6NCQ9 220 aa12.7□□□□□ -0.38
SHQ1-206ENST00000471526 FAM74A7A6NL05 159 aa12.7□□□□□ -0.38
SHQ1-206ENST00000471526 RHODO00212 210 aa12.7□□□□□ -0.38
SHQ1-206ENST00000471526 SH2D1AO60880 128 aa12.7□□□□□ -0.38
SHQ1-206ENST00000471526 GIPP09681 153 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms