RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 PRO0461Q9UI25 63 aa9.99□□□□□ -0.81
SFXN3-205ENST00000470252 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
SFXN3-205ENST00000470252 TRAV21A0A0B4J279 112 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 ZNF815PA8K554 130 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
SFXN3-205ENST00000470252 OR10J6PQ8NGY7 276 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 LINC00477Q96M19 166 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 ASH1LQ9NR48 2969 aaKnown RBP9.98□□□□□ -0.81
SFXN3-205ENST00000470252 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 NBASA2RRP1 2371 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 SPTBN1Q01082 2364 aaKnown RBP9.98□□□□□ -0.81
SFXN3-205ENST00000470252 EPG5Q9HCE0 2579 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 PRSS29PA6NIE9 313 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 TMEM219Q86XT9 240 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 C5orf56Q8N8D9 126 aa9.98□□□□□ -0.81
SFXN3-205ENST00000470252 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
SFXN3-205ENST00000470252 INSL3P51460 131 aa9.97□□□□□ -0.81
SFXN3-205ENST00000470252 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
SFXN3-205ENST00000470252 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
SFXN3-205ENST00000470252 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
SFXN3-205ENST00000470252 ARL3P36405 182 aa9.97□□□□□ -0.81
SFXN3-205ENST00000470252 SPTA1P02549 2419 aa9.96□□□□□ -0.81
SFXN3-205ENST00000470252 RNASE4P34096 147 aaKnown RBP9.96□□□□□ -0.81
SFXN3-205ENST00000470252 GPHB5Q86YW7 130 aa9.96□□□□□ -0.81
SFXN3-205ENST00000470252 PLEKHB2Q96CS7 222 aa9.96□□□□□ -0.81
SFXN3-205ENST00000470252 SVEP1Q4LDE5 3571 aa9.96□□□□□ -0.81
SFXN3-205ENST00000470252 MUC4Q99102 2169 aa9.96□□□□□ -0.81
SFXN3-205ENST00000470252 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.82
SFXN3-205ENST00000470252 NPFFO15130 113 aa9.96□□□□□ -0.82
SFXN3-205ENST00000470252 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.82
SFXN3-205ENST00000470252 UNQ9165/PRO28630Q6UXU0 137 aa9.96□□□□□ -0.82
SFXN3-205ENST00000470252 OVOL1O14753 267 aa9.95□□□□□ -0.82
SFXN3-205ENST00000470252 GNRH2O43555 120 aa9.95□□□□□ -0.82
SFXN3-205ENST00000470252 PKD1L2Q7Z442 2459 aa9.95□□□□□ -0.82
SFXN3-205ENST00000470252 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
SFXN3-205ENST00000470252 APOMO95445 188 aa9.95□□□□□ -0.82
SFXN3-205ENST00000470252 TRBV12-3P01733 135 aa9.95□□□□□ -0.82
SFXN3-205ENST00000470252 RPL11P62913 178 aaKnown RBP9.95□□□□□ -0.82
SFXN3-205ENST00000470252 A0A1W2PPR1 153 aa9.94□□□□□ -0.82
SFXN3-205ENST00000470252 FAM223BA6NKX1 122 aa9.94□□□□□ -0.82
SFXN3-205ENST00000470252 F6UB75 175 aa9.94□□□□□ -0.82
SFXN3-205ENST00000470252 DUSP14O95147 198 aaKnown RBP9.94□□□□□ -0.82
SFXN3-205ENST00000470252 SFTA2Q6UW10 78 aa9.94□□□□□ -0.82
SFXN3-205ENST00000470252 FAM223AQ8IWN6 122 aa9.94□□□□□ -0.82
SFXN3-205ENST00000470252 KLHL30-AS1Q8NEE0 82 aa9.94□□□□□ -0.82
SFXN3-205ENST00000470252 DEFB104AQ8WTQ1 72 aa9.94□□□□□ -0.82
SFXN3-205ENST00000470252 DLX4Q92988 240 aaPredicted RBP9.94□□□□□ -0.82
SFXN3-205ENST00000470252 IGKV3-7A0A075B6H7 116 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 SOCS3O14543 225 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
SFXN3-205ENST00000470252 COX6B1P14854 86 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 EMP1P54849 157 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 UCNP55089 124 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 ITPR1Q14643 2758 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 IGHV3OR16-10A0A075B7F0 116 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 LOC107984156A0A0G2JMH3 177 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 PPP1R17O96001 155 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 MED14OSP0DP75 135 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 ARL17AQ8IVW1 177 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 MOB4Q9Y3A3 225 aa9.93□□□□□ -0.82
SFXN3-205ENST00000470252 C11orf86A6NJI1 115 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 TSPAN13O95857 204 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 CRYGDP07320 174 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 PSMB2P49721 201 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 UBE2D1P51668 147 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 CFAP126Q5VTH2 177 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
SFXN3-205ENST00000470252 NDUFA4O00483 81 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 C1QTNF4Q9BXJ3 329 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 BPESC1Q9GZL8 116 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 UBTD1Q9HAC8 227 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
SFXN3-205ENST00000470252 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
SFXN3-205ENST00000470252 LMO4P61968 165 aa9.91□□□□□ -0.82
SFXN3-205ENST00000470252 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
SFXN3-205ENST00000470252 TSHBP01222 138 aa9.91□□□□□ -0.82
SFXN3-205ENST00000470252 HERVK_113P61574 105 aa9.91□□□□□ -0.82
SFXN3-205ENST00000470252 FOXI1Q12951 378 aa9.91□□□□□ -0.82
SFXN3-205ENST00000470252 ZFP2Q6ZN57 461 aa9.91□□□□□ -0.82
SFXN3-205ENST00000470252 FAM19A4Q96LR4 140 aa9.91□□□□□ -0.82
SFXN3-205ENST00000470252 IGHV3-11P01762 117 aa9.9□□□□□ -0.82
SFXN3-205ENST00000470252 ZNF418Q8TF45 676 aaPredicted RBP9.9□□□□□ -0.82
SFXN3-205ENST00000470252 PRORYQ9H606 182 aa9.9□□□□□ -0.82
SFXN3-205ENST00000470252 AKAP6Q13023 2319 aa9.9□□□□□ -0.82
SFXN3-205ENST00000470252 KMT2BQ9UMN6 2715 aaPredicted RBP9.9□□□□□ -0.83
SFXN3-205ENST00000470252 IGHV1-69DA0A0B4J2H0 117 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 CD7P09564 240 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 RPL39P62891 51 aaKnown RBP9.89□□□□□ -0.83
SFXN3-205ENST00000470252 PMVKQ15126 192 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 JPT2Q9H910 190 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 KIF25-AS1Q9Y6Z4 181 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 COL6A6A6NMZ7 2263 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 ZFHX3Q15911 3703 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 A0A0J9YY99 117 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 LINC00315P59091 139 aa9.89□□□□□ -0.83
SFXN3-205ENST00000470252 APRG1Q8IVJ8 170 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms