RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ZNF124Q15973 351 aa12.94□□□□□ -0.34
MRPL28-208ENST00000469744 LYZL1Q6UWQ5 148 aa12.94□□□□□ -0.34
MRPL28-208ENST00000469744 APRG1Q8IVJ8 170 aa12.94□□□□□ -0.34
MRPL28-208ENST00000469744 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
MRPL28-208ENST00000469744 CNFNQ9BYD5 112 aa12.94□□□□□ -0.34
MRPL28-208ENST00000469744 STARD9Q9P2P6 4700 aa12.93□□□□□ -0.34
MRPL28-208ENST00000469744 TSTD3H0UI37 97 aa12.93□□□□□ -0.34
MRPL28-208ENST00000469744 RPL35AP18077 110 aaKnown RBP12.93□□□□□ -0.34
MRPL28-208ENST00000469744 FER1L6-AS1Q8NA97 138 aa12.93□□□□□ -0.34
MRPL28-208ENST00000469744 OVOL2Q9BRP0 275 aa12.93□□□□□ -0.34
MRPL28-208ENST00000469744 SCGB1D1O95968 90 aa12.92□□□□□ -0.34
MRPL28-208ENST00000469744 PRB4P10163 310 aaPredicted RBP12.92□□□□□ -0.34
MRPL28-208ENST00000469744 RAB4AP20338 218 aa12.92□□□□□ -0.34
MRPL28-208ENST00000469744 WFDC3Q8IUB2 231 aa12.92□□□□□ -0.34
MRPL28-208ENST00000469744 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
MRPL28-208ENST00000469744 C20orf173Q96LM9 149 aa12.92□□□□□ -0.34
MRPL28-208ENST00000469744 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
MRPL28-208ENST00000469744 LINC00587B1AMM8 73 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 HSBP1O75506 76 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 PMCHP20382 165 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 DEFB135Q30KP9 77 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 ZNF575Q86XF7 245 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 OR10J6PQ8NGY7 276 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 TMSB15BA0A087X1C1 80 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 ORM1P02763 201 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
MRPL28-208ENST00000469744 NIT1Q86X76 327 aa12.91□□□□□ -0.34
MRPL28-208ENST00000469744 ID1P41134 155 aa12.9□□□□□ -0.34
MRPL28-208ENST00000469744 APOC4P55056 127 aa12.9□□□□□ -0.34
MRPL28-208ENST00000469744 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
MRPL28-208ENST00000469744 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
MRPL28-208ENST00000469744 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
MRPL28-208ENST00000469744 TPPP3Q9BW30 176 aa12.89□□□□□ -0.35
MRPL28-208ENST00000469744 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
MRPL28-208ENST00000469744 TEX43Q6ZNM6 134 aa12.88□□□□□ -0.35
MRPL28-208ENST00000469744 ZNF664Q8N3J9 261 aa12.88□□□□□ -0.35
MRPL28-208ENST00000469744 URB1-AS1Q96HZ7 61 aa12.88□□□□□ -0.35
MRPL28-208ENST00000469744 TMEM191AQ9H0A3 160 aa12.88□□□□□ -0.35
MRPL28-208ENST00000469744 SPRY2O43597 315 aa12.87□□□□□ -0.35
MRPL28-208ENST00000469744 LINC00614P0C842 121 aa12.87□□□□□ -0.35
MRPL28-208ENST00000469744 ZNF705DP0CH99 300 aaPredicted RBP12.87□□□□□ -0.35
MRPL28-208ENST00000469744 ZNF705BP0CI00 300 aaPredicted RBP12.87□□□□□ -0.35
MRPL28-208ENST00000469744 RNASEKQ6P5S7 137 aaKnown RBP12.87□□□□□ -0.35
MRPL28-208ENST00000469744 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
MRPL28-208ENST00000469744 IGKV3D-20A0A0C4DH25 116 aa12.86□□□□□ -0.35
MRPL28-208ENST00000469744 M0R2Z0 102 aa12.86□□□□□ -0.35
MRPL28-208ENST00000469744 OR5AL1P0C617 328 aa12.86□□□□□ -0.35
MRPL28-208ENST00000469744 SACSQ9NZJ4 4579 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 KIR2DL5BA0A0G2JN68 375 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 KIR2DL5BA0A0G2JPC4 375 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 A0A0J9YWU9 116 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 LCE6AA0A183 80 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 NTF3P20783 257 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 DEFB131AP59861 70 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 KIR2DL5AQ8N109 375 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 FAM19A2Q8N3H0 131 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 ZFAND2AQ8N6M9 145 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 DCANP1Q8TF63 244 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 AGRNO00468 2067 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 KRTDAPP60985 99 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 CACNG7P62955 275 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 TWIST1Q15672 202 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 Q8N976 141 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 C11orf21Q9P2W6 132 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 TP53TG1Q9Y2A0 90 aa12.85□□□□□ -0.35
MRPL28-208ENST00000469744 SNAI2O43623 268 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 PPBPP02775 128 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 C3orf79P0CE67 100 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 DDTP30046 118 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 CMC4P56277 68 aaPredicted RBP12.84□□□□□ -0.35
MRPL28-208ENST00000469744 ORMDL3Q8N138 153 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 IL17DQ8TAD2 202 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 RNF183Q96D59 192 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
MRPL28-208ENST00000469744 RYR2Q92736 4967 aa12.83□□□□□ -0.36
MRPL28-208ENST00000469744 MED14OSP0DP75 135 aa12.83□□□□□ -0.36
MRPL28-208ENST00000469744 CTAG1AP78358 180 aa12.83□□□□□ -0.36
MRPL28-208ENST00000469744 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.36
MRPL28-208ENST00000469744 CSTL1Q9H114 145 aa12.83□□□□□ -0.36
MRPL28-208ENST00000469744 PRO1933Q9H354 126 aa12.83□□□□□ -0.36
MRPL28-208ENST00000469744 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.36
MRPL28-208ENST00000469744 LYSTQ99698 3801 aa12.82□□□□□ -0.36
MRPL28-208ENST00000469744 K7EQG2 157 aa12.82□□□□□ -0.36
MRPL28-208ENST00000469744 AMN1Q8IY45 258 aa12.82□□□□□ -0.36
MRPL28-208ENST00000469744 C20orf144Q9BQM9 153 aa12.82□□□□□ -0.36
MRPL28-208ENST00000469744 TRAV2A0A0B4J234 112 aa12.81□□□□□ -0.36
MRPL28-208ENST00000469744 ZNF688P0C7X2 276 aa12.81□□□□□ -0.36
MRPL28-208ENST00000469744 PRR9Q5T870 116 aa12.81□□□□□ -0.36
MRPL28-208ENST00000469744 PRELID3AQ96N28 172 aa12.81□□□□□ -0.36
MRPL28-208ENST00000469744 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
MRPL28-208ENST00000469744 D6R8Y8 96 aa12.8□□□□□ -0.36
MRPL28-208ENST00000469744 BTF3P20290 206 aaKnown RBP12.8□□□□□ -0.36
MRPL28-208ENST00000469744 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
MRPL28-208ENST00000469744 FA2HQ7L5A8 372 aa12.79□□□□□ -0.36
MRPL28-208ENST00000469744 SMIM15Q7Z3B0 74 aa12.79□□□□□ -0.36
MRPL28-208ENST00000469744 PRSS3P2Q8NHM4 247 aa12.79□□□□□ -0.36
MRPL28-208ENST00000469744 RNF185Q96GF1 192 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms