RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 CACNG7P62955 275 aa11.87□□□□□ -0.51
C19orf54-202ENST00000469741 LAMTOR2Q9Y2Q5 125 aa11.87□□□□□ -0.51
C19orf54-202ENST00000469741 IGKV3-7A0A075B6H7 116 aa11.87□□□□□ -0.51
C19orf54-202ENST00000469741 CKS2P33552 79 aa11.87□□□□□ -0.51
C19orf54-202ENST00000469741 UQCR10Q9UDW1 63 aa11.87□□□□□ -0.51
C19orf54-202ENST00000469741 PAM16Q9Y3D7 125 aa11.87□□□□□ -0.51
C19orf54-202ENST00000469741 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
C19orf54-202ENST00000469741 MS4A6AQ9H2W1 248 aa11.86□□□□□ -0.51
C19orf54-202ENST00000469741 SIGLEC8Q9NYZ4 499 aa11.86□□□□□ -0.51
C19orf54-202ENST00000469741 HSPB8Q9UJY1 196 aa11.86□□□□□ -0.51
C19orf54-202ENST00000469741 DNAH3Q8TD57 4116 aa11.85□□□□□ -0.51
C19orf54-202ENST00000469741 F6UB75 175 aa11.85□□□□□ -0.51
C19orf54-202ENST00000469741 MED14OSP0DP75 135 aa11.85□□□□□ -0.51
C19orf54-202ENST00000469741 HOXD3P31249 432 aaPredicted RBP11.85□□□□□ -0.51
C19orf54-202ENST00000469741 IFI27P40305 119 aaPredicted RBP11.85□□□□□ -0.51
C19orf54-202ENST00000469741 DEFB1P60022 68 aa11.85□□□□□ -0.51
C19orf54-202ENST00000469741 Q6ZQT7 251 aa11.85□□□□□ -0.51
C19orf54-202ENST00000469741 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
C19orf54-202ENST00000469741 SYS1-DBNDD2H3BUS1 97 aa11.84□□□□□ -0.51
C19orf54-202ENST00000469741 PRKDCP78527 4128 aaKnown RBP11.84□□□□□ -0.51
C19orf54-202ENST00000469741 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
C19orf54-202ENST00000469741 OR10AG1Q8NH19 301 aa11.84□□□□□ -0.51
C19orf54-202ENST00000469741 K7EQG2 157 aa11.84□□□□□ -0.51
C19orf54-202ENST00000469741 NPYP01303 97 aa11.84□□□□□ -0.51
C19orf54-202ENST00000469741 COL5A1-AS1Q5SY13 56 aa11.84□□□□□ -0.51
C19orf54-202ENST00000469741 ODF3Q96PU9 254 aa11.84□□□□□ -0.51
C19orf54-202ENST00000469741 KLLNB2CW77 178 aa11.83□□□□□ -0.52
C19orf54-202ENST00000469741 SNRPD3P62318 126 aaKnown RBP11.83□□□□□ -0.52
C19orf54-202ENST00000469741 LINC00173Q6ZV60 143 aa11.83□□□□□ -0.52
C19orf54-202ENST00000469741 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.52
C19orf54-202ENST00000469741 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 DLEU1O43261 78 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 RNASE4P34096 147 aaKnown RBP11.82□□□□□ -0.52
C19orf54-202ENST00000469741 SPATA45Q537H7 98 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 KHDC1LQ5JSQ8 128 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 SPANXN1Q5VSR9 72 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 PET117Q6UWS5 81 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 WFDC3Q8IUB2 231 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 SMKR1H3BMG3 65 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 H3BVH4 76 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 J3KRW8 73 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 ASIPP42127 132 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 C4orf3Q8WVX3 66 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
C19orf54-202ENST00000469741 TRAV9-2A0A087WT02 112 aa11.81□□□□□ -0.52
C19orf54-202ENST00000469741 NCR2O95944 276 aa11.81□□□□□ -0.52
C19orf54-202ENST00000469741 IGLC3P0DOY3 106 aa11.81□□□□□ -0.52
C19orf54-202ENST00000469741 ANXA2RQ3ZCQ2 193 aa11.81□□□□□ -0.52
C19orf54-202ENST00000469741 SPATA12Q7Z6I5 190 aa11.81□□□□□ -0.52
C19orf54-202ENST00000469741 SCRT2Q9NQ03 307 aa11.81□□□□□ -0.52
C19orf54-202ENST00000469741 TNFRSF6BO95407 300 aa11.8□□□□□ -0.52
C19orf54-202ENST00000469741 EVI2AP22794 236 aa11.8□□□□□ -0.52
C19orf54-202ENST00000469741 LEPP41159 167 aa11.8□□□□□ -0.52
C19orf54-202ENST00000469741 MRPS16Q9Y3D3 137 aaKnown RBP11.8□□□□□ -0.52
C19orf54-202ENST00000469741 A0A096LNJ9 63 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 A0A0J9YX75 114 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 PRSS47A8MTI9 375 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 LINC01619G3V211 115 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 ZNF688P0C7X2 276 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 PSMG4Q5JS54 123 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 DEFB125Q8N687 156 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
C19orf54-202ENST00000469741 ZNF25P17030 456 aaPredicted RBP11.79□□□□□ -0.52
C19orf54-202ENST00000469741 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
C19orf54-202ENST00000469741 TFPI2P48307 235 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 TMEM208Q9BTX3 173 aa11.79□□□□□ -0.52
C19orf54-202ENST00000469741 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
C19orf54-202ENST00000469741 KIR3DS1Q14943 382 aa11.78□□□□□ -0.52
C19orf54-202ENST00000469741 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
C19orf54-202ENST00000469741 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
C19orf54-202ENST00000469741 GOLT1BQ9Y3E0 138 aa11.78□□□□□ -0.52
C19orf54-202ENST00000469741 TSSC4Q9Y5U2 329 aaPredicted RBP11.78□□□□□ -0.52
C19orf54-202ENST00000469741 DUSP14O95147 198 aaKnown RBP11.77□□□□□ -0.52
C19orf54-202ENST00000469741 HBDP02042 147 aa11.77□□□□□ -0.52
C19orf54-202ENST00000469741 SLURP1P55000 103 aa11.77□□□□□ -0.52
C19orf54-202ENST00000469741 LINC01545Q5VT33 79 aa11.77□□□□□ -0.52
C19orf54-202ENST00000469741 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.52
C19orf54-202ENST00000469741 DPF1Q92782 380 aa11.77□□□□□ -0.52
C19orf54-202ENST00000469741 PEMTQ9UBM1 199 aa11.77□□□□□ -0.52
C19orf54-202ENST00000469741 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
C19orf54-202ENST00000469741 C7orf71A4D174 169 aa11.77□□□□□ -0.53
C19orf54-202ENST00000469741 GAS8-AS1O95177 125 aa11.77□□□□□ -0.53
C19orf54-202ENST00000469741 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.53
C19orf54-202ENST00000469741 KLHL30-AS1Q8NEE0 82 aa11.77□□□□□ -0.53
C19orf54-202ENST00000469741 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.53
C19orf54-202ENST00000469741 PHLDA3Q9Y5J5 127 aa11.77□□□□□ -0.53
C19orf54-202ENST00000469741 GNRH2O43555 120 aa11.76□□□□□ -0.53
C19orf54-202ENST00000469741 NXPH4O95158 308 aa11.76□□□□□ -0.53
C19orf54-202ENST00000469741 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
C19orf54-202ENST00000469741 FAM159AQ6UWV7 190 aa11.76□□□□□ -0.53
C19orf54-202ENST00000469741 FOXI2Q6ZQN5 318 aa11.76□□□□□ -0.53
C19orf54-202ENST00000469741 Q8N8P6 123 aa11.76□□□□□ -0.53
C19orf54-202ENST00000469741 NRACQ8N912 160 aa11.76□□□□□ -0.53
C19orf54-202ENST00000469741 OR11H1Q8NG94 326 aa11.76□□□□□ -0.53
C19orf54-202ENST00000469741 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms