RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 U3KQE9 123 aa9.14□□□□□ -0.95
VARS2-205ENST00000469358 TRBV7-1A0A0A6YYK4 115 aa9.14□□□□□ -0.95
VARS2-205ENST00000469358 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 DUSP14O95147 198 aaKnown RBP9.13□□□□□ -0.95
VARS2-205ENST00000469358 LGALS1P09382 135 aaKnown RBP9.13□□□□□ -0.95
VARS2-205ENST00000469358 ITLN2Q8WWU7 325 aaPredicted RBP9.13□□□□□ -0.95
VARS2-205ENST00000469358 BAALCQ8WXS3 180 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 PRADC1Q9BSG0 188 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
VARS2-205ENST00000469358 A0A087WWL8 130 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 HLA-DRB4P13762 266 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 HLA-DRB4X5D2U9 266 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 CENPEQ02224 2701 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 ZANQ9Y493 2812 aa9.13□□□□□ -0.95
VARS2-205ENST00000469358 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 SLC25A16P16260 332 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 AZU1P20160 251 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 PLNP26678 52 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 RPL39P62891 51 aaKnown RBP9.12□□□□□ -0.95
VARS2-205ENST00000469358 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 SCGB2A2Q13296 93 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 IGHV4-4A0A075B6R2 117 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 TGFAP01135 160 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 IGKV3-20P01619 116 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 LY6DQ14210 128 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
VARS2-205ENST00000469358 USP9YO00507 2555 aaPredicted RBP9.11□□□□□ -0.95
VARS2-205ENST00000469358 RNASE3P12724 160 aaKnown RBP9.11□□□□□ -0.95
VARS2-205ENST00000469358 ASIPP42127 132 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 BLCAPP62952 87 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 TOMM6Q96B49 74 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 SPAG8Q99932 426 aaPredicted RBP9.11□□□□□ -0.95
VARS2-205ENST00000469358 FLNCQ14315 2725 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 C19orf84I3L1E1 186 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 RRN3P1Q2M238 152 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 MORN3Q6PF18 240 aaPredicted RBP9.11□□□□□ -0.95
VARS2-205ENST00000469358 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 MRAP2Q96G30 205 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 POLQO75417 2590 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 DPH3P1Q9H4G8 78 aa9.11□□□□□ -0.95
VARS2-205ENST00000469358 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 PF4V1P10720 104 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 SAMD13Q5VXD3 122 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 TRAV21A0A0B4J279 112 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 APOMO95445 188 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 IGHV4-38-2P0DP08 117 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 ZFP2Q6ZN57 461 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 C9orf139Q6ZV77 190 aa9.1□□□□□ -0.95
VARS2-205ENST00000469358 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 TSHBP01222 138 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 TMEM95Q3KNT9 176 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 SOCS3O14543 225 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 CRYGDP07320 174 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 KLRB1Q12918 225 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 ORMDL2Q53FV1 153 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 FAM74A4Q5TZK3 123 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 MRPL53Q96EL3 112 aaKnown RBP9.09□□□□□ -0.95
VARS2-205ENST00000469358 OPRPNQ99935 248 aaPredicted RBP9.09□□□□□ -0.95
VARS2-205ENST00000469358 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 F5H697 171 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
VARS2-205ENST00000469358 GAGE13Q4V321 117 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 PTH2Q96A98 100 aa9.09□□□□□ -0.95
VARS2-205ENST00000469358 MRPL16Q9NX20 251 aaKnown RBP9.09□□□□□ -0.95
VARS2-205ENST00000469358 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 RHPN1-AS1Q9BWJ2 59 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 A0A1B0GWB2 263 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 GAGE12HA6NDE8 117 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 LINC00477Q96M19 166 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 PRO0461Q9UI25 63 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 TRAV12-3A0A0B4J271 114 aa9.08□□□□□ -0.96
VARS2-205ENST00000469358 HOXA3O43365 443 aaPredicted RBP9.08□□□□□ -0.96
VARS2-205ENST00000469358 CFAP46Q8IYW2 2715 aa9.07□□□□□ -0.96
VARS2-205ENST00000469358 TRAV12-2A0A075B6T6 113 aa9.07□□□□□ -0.96
VARS2-205ENST00000469358 TSPEAR-AS2P59090 65 aa9.07□□□□□ -0.96
VARS2-205ENST00000469358 ZNF418Q8TF45 676 aaPredicted RBP9.07□□□□□ -0.96
VARS2-205ENST00000469358 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
VARS2-205ENST00000469358 F8W1H4 67 aa9.07□□□□□ -0.96
VARS2-205ENST00000469358 H3BUX3 64 aa9.07□□□□□ -0.96
VARS2-205ENST00000469358 IGHV3-64A0A075B6Q5 118 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 C19orf54Q5BKX5 351 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 C10orf99Q6UWK7 81 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 ZNF256Q9Y2P7 627 aaPredicted RBP9.06□□□□□ -0.96
VARS2-205ENST00000469358 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 IGHV4-39P01824 125 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 PSMB2P49721 201 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 LINC00315P59091 139 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 PSMG4Q5JS54 123 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
VARS2-205ENST00000469358 TAL2Q16559 108 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 SIGMAR1Q99720 223 aa9.06□□□□□ -0.96
VARS2-205ENST00000469358 IGLV4-69A0A075B6H9 119 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms