RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 NCKAP5O14513 1909 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 H3BMM0 161 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 UBE2WQ96B02 151 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 JPT2Q9H910 190 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 TNCP24821 2201 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 C16orf54Q6UWD8 224 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 TIMM21Q9BVV7 248 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 EML6Q6ZMW3 1958 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 A6NDX4 124 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 IGHV1-24A0A0C4DH33 117 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 RMI2Q96E14 147 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 C20orf78Q9BR46 151 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
LIMS2-213ENST00000469300 TEX22C9J3V5 150 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 BUB3O43684 328 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 DYSFO75923 2080 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 IGHV3-64A0A075B6Q5 118 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 C19orf84I3L1E1 186 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 MRPL51Q4U2R6 128 aaKnown RBP11.74□□□□□ -0.53
LIMS2-213ENST00000469300 LYPD6BQ8NI32 183 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 DEFB136Q30KP8 78 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 DYNAPQ8N1N2 210 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 ZNRF2Q8NHG8 242 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 RITA1Q96K30 269 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 TP53TG1Q9Y2A0 90 aa11.74□□□□□ -0.53
LIMS2-213ENST00000469300 PAX4O43316 350 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 SLURP1P55000 103 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 ZNF843Q8N446 348 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 CITED2Q99967 270 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-213ENST00000469300 CCDC168Q8NDH2 2452 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 TRAV8-3A0A0A6YYJ7 113 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 GP9P14770 177 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 RHOHQ15669 191 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 PRIMA1Q86XR5 153 aa11.73□□□□□ -0.53
LIMS2-213ENST00000469300 A0A0U1RRA0 63 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 BOD1L2Q8IYS8 172 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 NAV3Q8IVL0 2385 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 ODF3BA8MYP8 253 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 H3BMG7 143 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 TRACP01848 142 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 CFHR3Q02985 330 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 SMIM2Q9BVW6 85 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 SIVA1O15304 175 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 PMVKQ15126 192 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 OVOL2Q9BRP0 275 aa11.72□□□□□ -0.53
LIMS2-213ENST00000469300 TLN1Q9Y490 2541 aaKnown RBP11.72□□□□□ -0.53
LIMS2-213ENST00000469300 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
LIMS2-213ENST00000469300 Q6ZVH6 145 aa11.71□□□□□ -0.53
LIMS2-213ENST00000469300 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-213ENST00000469300 WNK1Q9H4A3 2382 aa11.71□□□□□ -0.53
LIMS2-213ENST00000469300 CEP192Q8TEP8 1941 aa11.71□□□□□ -0.53
LIMS2-213ENST00000469300 K7EMI3 77 aa11.71□□□□□ -0.53
LIMS2-213ENST00000469300 INSL3P51460 131 aa11.71□□□□□ -0.53
LIMS2-213ENST00000469300 C17orf77Q96MU5 243 aa11.71□□□□□ -0.53
LIMS2-213ENST00000469300 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.54
LIMS2-213ENST00000469300 LGALS9BQ3B8N2 356 aa11.71□□□□□ -0.54
LIMS2-213ENST00000469300 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.54
LIMS2-213ENST00000469300 TAL2Q16559 108 aa11.71□□□□□ -0.54
LIMS2-213ENST00000469300 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
LIMS2-213ENST00000469300 C2orf70A6NJV1 201 aa11.7□□□□□ -0.54
LIMS2-213ENST00000469300 C4orf3Q8WVX3 66 aa11.7□□□□□ -0.54
LIMS2-213ENST00000469300 NEGR1Q7Z3B1 354 aa11.7□□□□□ -0.54
LIMS2-213ENST00000469300 DEFB104AQ8WTQ1 72 aa11.7□□□□□ -0.54
LIMS2-213ENST00000469300 IGHV4OR15-8A0A075B7B6 117 aa11.69□□□□□ -0.54
LIMS2-213ENST00000469300 A0A087WW49 117 aa11.69□□□□□ -0.54
LIMS2-213ENST00000469300 F6UB75 175 aa11.69□□□□□ -0.54
LIMS2-213ENST00000469300 HLA-DMBP28068 263 aa11.69□□□□□ -0.54
LIMS2-213ENST00000469300 IGLV2-14P01704 120 aa11.69□□□□□ -0.54
LIMS2-213ENST00000469300 ZNF561-AS1K7EIQ3 104 aa11.69□□□□□ -0.54
LIMS2-213ENST00000469300 PATE2Q6UY27 113 aa11.69□□□□□ -0.54
LIMS2-213ENST00000469300 LEPROTO15243 131 aa11.68□□□□□ -0.54
LIMS2-213ENST00000469300 C11orf71Q6IPW1 123 aa11.68□□□□□ -0.54
LIMS2-213ENST00000469300 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
LIMS2-213ENST00000469300 C22orf34Q6ZV56 151 aa11.67□□□□□ -0.54
LIMS2-213ENST00000469300 SH2D6Q7Z4S9 175 aa11.67□□□□□ -0.54
LIMS2-213ENST00000469300 C16orf74Q96GX8 76 aa11.67□□□□□ -0.54
LIMS2-213ENST00000469300 U3KQE9 123 aa11.67□□□□□ -0.54
LIMS2-213ENST00000469300 EGR2P11161 476 aaPredicted RBP11.67□□□□□ -0.54
LIMS2-213ENST00000469300 UTF1Q5T230 341 aa11.67□□□□□ -0.54
LIMS2-213ENST00000469300 CHD3Q12873 2000 aaKnown RBP11.67□□□□□ -0.54
LIMS2-213ENST00000469300 PRRC2CQ9Y520 2896 aaKnown RBP11.67□□□□□ -0.54
LIMS2-213ENST00000469300 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 IGHV4-31P0DP07 118 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 DSCAMO60469 2012 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 DNAJC9-AS1A6NH13 148 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 KLF5Q13887 457 aaPredicted RBP11.66□□□□□ -0.54
LIMS2-213ENST00000469300 PIFOQ8TCI5 191 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 FANCD2OSQ96PS1 177 aa11.66□□□□□ -0.54
LIMS2-213ENST00000469300 TRAV26-1A0A087WT03 109 aa11.65□□□□□ -0.54
LIMS2-213ENST00000469300 IGHG4P01861 327 aa11.65□□□□□ -0.54
LIMS2-213ENST00000469300 CEND1Q8N111 149 aa11.65□□□□□ -0.54
LIMS2-213ENST00000469300 GATD1Q8NB37 220 aa11.65□□□□□ -0.54
LIMS2-213ENST00000469300 NOP10Q9NPE3 64 aaKnown RBP11.65□□□□□ -0.54
LIMS2-213ENST00000469300 C15orf53Q8NAA6 179 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms