RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TMEM158Q8WZ71 300 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 LINC00526Q96FQ7 95 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 ZFHX3Q15911 3703 aa7.77□□□□□ -1.16
NUP50-214ENST00000469163 TEX49A0A1B0GTD5 131 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 P01737 135 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 HBDP02042 147 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 AMN1Q8IY45 258 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 NXT2Q9NPJ8 142 aaKnown RBP7.77□□□□□ -1.17
NUP50-214ENST00000469163 M0R2P5 195 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 HAX1O00165 279 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 MPDU1O75352 247 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 NUP37Q8NFH4 326 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 SLC25A39Q9BZJ4 359 aaPredicted RBP7.77□□□□□ -1.17
NUP50-214ENST00000469163 AMMECR1Q9Y4X0 333 aaPredicted RBP7.77□□□□□ -1.17
NUP50-214ENST00000469163 IGHV4-30-2A0A087WSY4 118 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 NPYP01303 97 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 DAZAP2Q15038 168 aaPredicted RBP7.77□□□□□ -1.17
NUP50-214ENST00000469163 TAL2Q16559 108 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 MLANAQ16655 118 aa7.77□□□□□ -1.17
NUP50-214ENST00000469163 H3BTX0 84 aa7.76□□□□□ -1.17
NUP50-214ENST00000469163 IGKCP01834 107 aa7.76□□□□□ -1.17
NUP50-214ENST00000469163 TRAV41A0A0B4J266 112 aa7.76□□□□□ -1.17
NUP50-214ENST00000469163 J3QKU1 62 aa7.76□□□□□ -1.17
NUP50-214ENST00000469163 HLA-DRB4P13762 266 aa7.76□□□□□ -1.17
NUP50-214ENST00000469163 Q5XG85 94 aa7.76□□□□□ -1.17
NUP50-214ENST00000469163 RPP21Q9H633 154 aaKnown RBP7.76□□□□□ -1.17
NUP50-214ENST00000469163 HLA-DRB4X5D2U9 266 aa7.76□□□□□ -1.17
NUP50-214ENST00000469163 IGHV3-49A0A0A0MS15 119 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 TIMM23O14925 209 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 IGHV4-39P01824 125 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 PDPNQ86YL7 162 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 C10orf105Q8TEF2 133 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 TRGV9Q99603 122 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 IGHV4-61A0A0C4DH41 118 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 A0A0U1RRA0 63 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 PFN2P35080 140 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 WFDC11Q8NEX6 87 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 A0A096LNJ9 63 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 H7C2G1 150 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 OVOL1O14753 267 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 CRYGDP07320 174 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 C8orf88P0DMB2 117 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 ZFP36P26651 326 aaKnown RBP7.75□□□□□ -1.17
NUP50-214ENST00000469163 MYCNOSP40205 109 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 EFNA4P52798 201 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 TMEM86BQ8N661 226 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 FOXC2Q99958 501 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 TPSG1Q9NRR2 321 aa7.75□□□□□ -1.17
NUP50-214ENST00000469163 RPUSD1Q9UJJ7 312 aaKnown RBP7.75□□□□□ -1.17
NUP50-214ENST00000469163 LOXP28300 417 aaPredicted RBP7.74□□□□□ -1.17
NUP50-214ENST00000469163 UBE2L3P68036 154 aaKnown RBP7.74□□□□□ -1.17
NUP50-214ENST00000469163 NPIPB3Q92617 1050 aa7.74□□□□□ -1.17
NUP50-214ENST00000469163 RITA1Q96K30 269 aa7.74□□□□□ -1.17
NUP50-214ENST00000469163 RETNQ9HD89 108 aa7.74□□□□□ -1.17
NUP50-214ENST00000469163 HHLA3Q9XRX5 114 aa7.74□□□□□ -1.17
NUP50-214ENST00000469163 TRAV13-1A0A0B4J241 112 aa7.74□□□□□ -1.17
NUP50-214ENST00000469163 IFI27L2Q9H2X8 130 aa7.74□□□□□ -1.17
NUP50-214ENST00000469163 CRIP2P52943 208 aaPredicted RBP7.74□□□□□ -1.17
NUP50-214ENST00000469163 C1orf229Q6ZS94 237 aaPredicted RBP7.74□□□□□ -1.17
NUP50-214ENST00000469163 VMO1Q7Z5L0 202 aa7.74□□□□□ -1.17
NUP50-214ENST00000469163 OXTP01178 125 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 RPL11P62913 178 aaKnown RBP7.73□□□□□ -1.17
NUP50-214ENST00000469163 C17orf58Q2M2W7 97 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 IGHV1-8P0DP01 117 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 LINC00596Q86U02 117 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 Q96MF0 132 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A10PA6NDY2 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A20PA6NIJ5 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A7PA6NKC0 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A22PA8MWA6 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A12PA8MX19 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A23PA8MXZ1 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 PEX7O00628 323 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A15PP0C7V4 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A13PP0C7W8 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A14PP0C7W9 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 FAM90A24PP0C7X0 464 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 SSUH2Q9Y2M2 353 aa7.73□□□□□ -1.17
NUP50-214ENST00000469163 D6R8Y8 96 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 DPM2O94777 84 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 TWIST1Q15672 202 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 FAM19A4Q96LR4 140 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 COX7CP15954 63 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 DUTP33316 252 aaKnown RBP7.72□□□□□ -1.17
NUP50-214ENST00000469163 SPANXCQ9NY87 97 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 IGHV3-66A0A0C4DH42 116 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 H3BMM0 161 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 UBE2D3P61077 147 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 UBE2D2P62837 147 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 TEX36Q5VZQ5 186 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 ZNF329Q86UD4 541 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 UBE2WQ96B02 151 aa7.72□□□□□ -1.17
NUP50-214ENST00000469163 FOXA2Q9Y261 457 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms