RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 FXYD2P54710 66 aa10.79□□□□□ -0.68
SMARCD3-205ENST00000469154 TMEM219Q86XT9 240 aa10.79□□□□□ -0.68
SMARCD3-205ENST00000469154 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
SMARCD3-205ENST00000469154 TTTY13Q9BZ97 58 aa10.79□□□□□ -0.68
SMARCD3-205ENST00000469154 TRAV12-1A0A0B4J245 112 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 TRAV21A0A0B4J279 112 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 NDUFA4O00483 81 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 OR10J6PQ8NGY7 276 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 ORMDL2Q53FV1 153 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 Q6ZQT7 251 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 TM2D2Q9BX73 214 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 CREBBPQ92793 2442 aa10.78□□□□□ -0.68
SMARCD3-205ENST00000469154 RNF223E7ERA6 249 aa10.77□□□□□ -0.68
SMARCD3-205ENST00000469154 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.68
SMARCD3-205ENST00000469154 TAL2Q16559 108 aa10.77□□□□□ -0.68
SMARCD3-205ENST00000469154 CEND1Q8N111 149 aa10.77□□□□□ -0.68
SMARCD3-205ENST00000469154 Q96MF0 132 aa10.77□□□□□ -0.68
SMARCD3-205ENST00000469154 K7EMI3 77 aa10.77□□□□□ -0.69
SMARCD3-205ENST00000469154 MED14OSP0DP75 135 aa10.77□□□□□ -0.69
SMARCD3-205ENST00000469154 KRTAP1-3Q8IUG1 177 aa10.77□□□□□ -0.69
SMARCD3-205ENST00000469154 ZFAND2AQ8N6M9 145 aa10.77□□□□□ -0.69
SMARCD3-205ENST00000469154 DPH3P1Q9H4G8 78 aa10.77□□□□□ -0.69
SMARCD3-205ENST00000469154 ZANQ9Y493 2812 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 A0A096LNT2 108 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 IGHV1-69DA0A0B4J2H0 117 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 SOCS3O14543 225 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 IGHV1-69P01742 117 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 ASIPP42127 132 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 C20orf78Q9BR46 151 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 MEGF9Q9H1U4 602 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 H3BUA1 57 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 H7C1H1 209 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 GPHB5Q86YW7 130 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 LINC00527Q9UJ94 153 aa10.76□□□□□ -0.69
SMARCD3-205ENST00000469154 F8VRH5 84 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 M0R381 172 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 SAP30O75446 220 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 BRI3O95415 125 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 S100A4P26447 101 aaKnown RBP10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 SUMO2P61956 95 aaKnown RBP10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 NEGR1Q7Z3B1 354 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 CELSR1Q9NYQ6 3014 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 IGF1P05019 195 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 WFDC11Q8NEX6 87 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 TOMM6Q96B49 74 aa10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 FLNBO75369 2602 aaKnown RBP10.75□□□□□ -0.69
SMARCD3-205ENST00000469154 MSMBP08118 114 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 PHLDA1Q8WV24 401 aaPredicted RBP10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 RASL10AQ92737 203 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 USMG5Q96IX5 58 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 PHLDA3Q9Y5J5 127 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 IGHV3OR16-10A0A075B7F0 116 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 B4DSR2 109 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 J3KRW8 73 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 MAPKAPK5-AS1Q8N8E1 139 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 FAM19A4Q96LR4 140 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 ITPR3Q14573 2671 aa10.74□□□□□ -0.69
SMARCD3-205ENST00000469154 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 TRBV7-9A0A0J9YWB2 115 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 LINC01619G3V211 115 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 G3V4G9 280 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 CIDEAO60543 219 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 TRBV12-3P01733 135 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 K7ERJ3 54 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 PPP1R17O96001 155 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
SMARCD3-205ENST00000469154 CSPG4Q6UVK1 2322 aa10.72□□□□□ -0.69
SMARCD3-205ENST00000469154 ZNF469Q96JG9 3925 aaPredicted RBP10.72□□□□□ -0.69
SMARCD3-205ENST00000469154 NEXN-AS1Q8NBZ9 246 aa10.72□□□□□ -0.69
SMARCD3-205ENST00000469154 OR11H12B2RN74 326 aa10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 MGPP08493 103 aa10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 BRD3OSQ6XYD6 125 aa10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 C14orf178Q8N769 122 aaPredicted RBP10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 LINC01356Q8N9X3 169 aa10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 OR11H1Q8NG94 326 aa10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 OR11H2Q8NH07 326 aa10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 CSTL1Q9H114 145 aa10.71□□□□□ -0.69
SMARCD3-205ENST00000469154 IGHG2P01859 326 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 MYO9AB2RTY4 2548 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 E9PLD3 99 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 TGFAP01135 160 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 HIST1H4GQ99525 98 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 KLK15Q9H2R5 256 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 FLNAP21333 2647 aaKnown RBP10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 CR1P17927 2039 aa10.7□□□□□ -0.7
SMARCD3-205ENST00000469154 MYMXA0A1B0GTQ4 84 aa10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 IGLL5B9A064 214 aa10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 NXPH4O95158 308 aa10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 RPL11P62913 178 aaKnown RBP10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 C2orf66Q6UXQ4 117 aa10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 IGHV3-11P01762 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms