RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 MIR17HGQ75NE6 70 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 Q9H521 79 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 PRR34Q9NV39 138 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 UQCC1Q9NVA1 299 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 CTDSP2O14595 271 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 SCGB1D2O95969 90 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 RANP62826 216 aaKnown RBP6.82□□□□□ -1.32
NEDD9-207ENST00000468612 IL18Q14116 193 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 PRR4Q16378 134 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 MAJINQ3KP22 176 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 OR2G3Q8NGZ4 309 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 LYPD6BQ8NI32 183 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 PSORS1C2Q9UIG4 136 aa6.82□□□□□ -1.32
NEDD9-207ENST00000468612 TRAV26-2A0A0B4J265 109 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 RGS5O15539 181 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 COX6A2Q02221 97 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 PIK3CD-AS1Q5SR53 167 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 ZNF664Q8N3J9 261 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 STPG4Q8N801 248 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 TMEM75Q8N9X5 138 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 JPT2Q9H910 190 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 TREM1Q9NP99 234 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
NEDD9-207ENST00000468612 RABL2AQ9UBK7 228 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-207ENST00000468612 UBE2L5PA0A1B0GUS4 154 aa6.8□□□□□ -1.32
NEDD9-207ENST00000468612 CST7O76096 145 aa6.8□□□□□ -1.32
NEDD9-207ENST00000468612 BAXQ07812 192 aa6.8□□□□□ -1.32
NEDD9-207ENST00000468612 Q6ZRP5 223 aa6.8□□□□□ -1.32
NEDD9-207ENST00000468612 MCFD2Q8NI22 146 aa6.8□□□□□ -1.32
NEDD9-207ENST00000468612 SLC25A21Q9BQT8 299 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-207ENST00000468612 A0A087WWL8 130 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 TRBV6-8A0A0A6YYG3 113 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 C9orf170A2RU37 121 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 FAM24AA6NFZ4 105 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 NDUFS6O75380 124 aaKnown RBP6.79□□□□□ -1.32
NEDD9-207ENST00000468612 MBPP02686 304 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-207ENST00000468612 ZNF80P51504 273 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-207ENST00000468612 UBE2D3P61077 147 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 UBE2D2P62837 147 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 IAH1Q2TAA2 248 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-207ENST00000468612 LGALSLQ3ZCW2 172 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-207ENST00000468612 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 DIRAS2Q96HU8 199 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 VCX3AQ9NNX9 186 aa6.79□□□□□ -1.32
NEDD9-207ENST00000468612 FGF7P21781 194 aa6.78□□□□□ -1.32
NEDD9-207ENST00000468612 FAUP35544 74 aaKnown RBP6.78□□□□□ -1.32
NEDD9-207ENST00000468612 CTF1Q16619 201 aa6.78□□□□□ -1.32
NEDD9-207ENST00000468612 PRR26Q8N8Z3 221 aa6.78□□□□□ -1.32
NEDD9-207ENST00000468612 PRSS3P2Q8NHM4 247 aa6.78□□□□□ -1.32
NEDD9-207ENST00000468612 BCL7BQ9BQE9 202 aa6.78□□□□□ -1.32
NEDD9-207ENST00000468612 SLIRPQ9GZT3 109 aaKnown RBP6.78□□□□□ -1.32
NEDD9-207ENST00000468612 A0A087WXM4 84 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 RHODO00212 210 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 CACNG7P62955 275 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 GOLT1AQ6ZVE7 132 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 HYLS1Q96M11 299 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 NPCDR1Q9BY65 106 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 NMES1Q9C002 83 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 NAA50Q9GZZ1 169 aaKnown RBP6.77□□□□□ -1.33
NEDD9-207ENST00000468612 GSKIPQ9P0R6 139 aa6.77□□□□□ -1.33
NEDD9-207ENST00000468612 RSL24D1Q9UHA3 163 aaKnown RBP6.77□□□□□ -1.33
NEDD9-207ENST00000468612 IGLV10-54A0A075B6I4 117 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 TRBV10-1A0A0K0K1A3 114 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 L7N2F9 121 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 OR7C2O60412 319 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 S100A11P31949 105 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 PKIAP61925 76 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 VAMP2P63027 116 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 RPL36AP83881 106 aaKnown RBP6.76□□□□□ -1.33
NEDD9-207ENST00000468612 SPANXN2Q5MJ10 180 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 RPL36ALQ969Q0 106 aaKnown RBP6.76□□□□□ -1.33
NEDD9-207ENST00000468612 C11orf1Q9H5F2 150 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 OTORQ9NRC9 128 aa6.76□□□□□ -1.33
NEDD9-207ENST00000468612 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 IFNA7P01567 189 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 BCAP31P51572 246 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 S100A10P60903 97 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 RBX1P62877 108 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 UBE2L3P68036 154 aaKnown RBP6.75□□□□□ -1.33
NEDD9-207ENST00000468612 ARL6IP6Q8N6S5 226 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 TRIM63Q969Q1 353 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 CHCHD5Q9BSY4 110 aa6.75□□□□□ -1.33
NEDD9-207ENST00000468612 A0A096LNI7 61 aa6.74□□□□□ -1.33
NEDD9-207ENST00000468612 PTTG1O95997 202 aa6.74□□□□□ -1.33
NEDD9-207ENST00000468612 RPS10P46783 165 aaKnown RBP6.74□□□□□ -1.33
NEDD9-207ENST00000468612 SULT1A1P50225 295 aa6.74□□□□□ -1.33
NEDD9-207ENST00000468612 OR10G8Q8NGN5 311 aa6.74□□□□□ -1.33
NEDD9-207ENST00000468612 CMTM2Q8TAZ6 248 aa6.74□□□□□ -1.33
NEDD9-207ENST00000468612 LYRM2Q9NU23 88 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-207ENST00000468612 IGSF23A1L1A6 192 aa6.73□□□□□ -1.33
NEDD9-207ENST00000468612 GCGP01275 180 aa6.73□□□□□ -1.33
NEDD9-207ENST00000468612 AP3S2P59780 193 aa6.73□□□□□ -1.33
NEDD9-207ENST00000468612 FAM74A4Q5TZK3 123 aa6.73□□□□□ -1.33
NEDD9-207ENST00000468612 TOMM5Q8N4H5 51 aa6.73□□□□□ -1.33
NEDD9-207ENST00000468612 C15orf56Q8N910 161 aa6.73□□□□□ -1.33
NEDD9-207ENST00000468612 OR5AC2Q9NZP5 309 aa6.73□□□□□ -1.33
NEDD9-207ENST00000468612 LSM5Q9Y4Y9 91 aaKnown RBP6.73□□□□□ -1.33
NEDD9-207ENST00000468612 IGKV3D-20A0A0C4DH25 116 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms