RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CIB3Q96Q77 187 aaPredicted RBP-2.1□□□□□ -2.75
SSB-208ENST00000468600 NPVFQ9HCQ7 196 aa-2.1□□□□□ -2.75
SSB-208ENST00000468600 SCN3BQ9NY72 215 aa-2.1□□□□□ -2.75
SSB-208ENST00000468600 ADGRL3Q9HAR2 1447 aa-2.1□□□□□ -2.75
SSB-208ENST00000468600 CEP290O15078 2479 aa-2.11□□□□□ -2.75
SSB-208ENST00000468600 CDK12Q9NYV4 1490 aaPredicted RBP-2.11□□□□□ -2.75
SSB-208ENST00000468600 I3L2K1 104 aa-2.11□□□□□ -2.75
SSB-208ENST00000468600 DEFB1P60022 68 aa-2.11□□□□□ -2.75
SSB-208ENST00000468600 POU6F1Q14863 301 aa-2.11□□□□□ -2.75
SSB-208ENST00000468600 TAF1AQ15573 450 aaPredicted RBP-2.11□□□□□ -2.75
SSB-208ENST00000468600 SLC48A1Q6P1K1 146 aa-2.11□□□□□ -2.75
SSB-208ENST00000468600 PHF5AQ7RTV0 110 aaKnown RBP-2.11□□□□□ -2.75
SSB-208ENST00000468600 OR4B1Q8NGF8 309 aa-2.11□□□□□ -2.75
SSB-208ENST00000468600 LYSTQ99698 3801 aa-2.11□□□□□ -2.75
SSB-208ENST00000468600 SIPA1L3O60292 1781 aaPredicted RBP-2.11□□□□□ -2.75
SSB-208ENST00000468600 ZCCHC6Q5VYS8 1495 aaKnown RBP-2.12□□□□□ -2.75
SSB-208ENST00000468600 DEGS1O15121 323 aa-2.12□□□□□ -2.75
SSB-208ENST00000468600 FKBP1CQ5VVH2 108 aa-2.12□□□□□ -2.75
SSB-208ENST00000468600 C4orf33Q8N1A6 199 aa-2.12□□□□□ -2.75
SSB-208ENST00000468600 DGCR14Q96DF8 476 aaKnown RBP-2.12□□□□□ -2.75
SSB-208ENST00000468600 DNAH11Q96DT5 4516 aa-2.12□□□□□ -2.75
SSB-208ENST00000468600 UBR2Q8IWV8 1755 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 DLEC1Q9Y238 1755 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 NCAPD3P42695 1498 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 A0A0C4DFX4 3053 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 TROQ12816 1431 aaPredicted RBP-2.13□□□□□ -2.75
SSB-208ENST00000468600 MFSD11O43934 449 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 MT1XP80297 61 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 RHOHQ15669 191 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 TMEM97Q5BJF2 176 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 OR8J3Q8NGG0 315 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 V9GYV3 84 aa-2.13□□□□□ -2.75
SSB-208ENST00000468600 GOLGA3Q08378 1498 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 NBEAQ8NFP9 2946 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 ERCC6L2Q5T890 1561 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 CCDC144AA2RUR9 1427 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 ATP5HO75947 161 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 OR2H1Q9GZK4 316 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 CTNNBIP1Q9NSA3 81 aaPredicted RBP-2.14□□□□□ -2.75
SSB-208ENST00000468600 NKIRAS1Q9NYS0 192 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 TANC2Q9HCD6 1990 aa-2.14□□□□□ -2.75
SSB-208ENST00000468600 FGD6Q6ZV73 1430 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 TRACP01848 142 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 TRGC2P03986 189 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 BCL2P10415 239 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 FABP4P15090 132 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 HBBP68871 147 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 MRPS36P82909 103 aaKnown RBP-2.15□□□□□ -2.75
SSB-208ENST00000468600 C3orf33Q6P1S2 294 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 IFT20Q8IY31 132 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 OR5A2Q8NGI9 324 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 OR10X1Q8NGY0 326 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 GPX7Q96SL4 187 aaPredicted RBP-2.15□□□□□ -2.75
SSB-208ENST00000468600 TAF9BQ9HBM6 251 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 C19orf12Q9NSK7 152 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 APLNQ9ULZ1 77 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 ATP6V1DQ9Y5K8 247 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 RTL9Q8NET4 1388 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 ADGRB1O14514 1584 aa-2.15□□□□□ -2.75
SSB-208ENST00000468600 ZZEF1O43149 2961 aa-2.16□□□□□ -2.75
SSB-208ENST00000468600 CFAP46Q8IYW2 2715 aa-2.16□□□□□ -2.75
SSB-208ENST00000468600 KIAA1549LQ6ZVL6 1849 aa-2.16□□□□□ -2.76
SSB-208ENST00000468600 TCRBV3S1A0A5B6 114 aa-2.16□□□□□ -2.76
SSB-208ENST00000468600 KALRNO60229 2985 aa-2.16□□□□□ -2.76
SSB-208ENST00000468600 IFNGP01579 166 aa-2.16□□□□□ -2.76
SSB-208ENST00000468600 DNAJB13P59910 316 aa-2.16□□□□□ -2.76
SSB-208ENST00000468600 BASP1P80723 227 aaKnown RBP-2.16□□□□□ -2.76
SSB-208ENST00000468600 SSBP1Q04837 148 aaKnown RBP-2.16□□□□□ -2.76
SSB-208ENST00000468600 OR5AK2Q8NH90 309 aa-2.16□□□□□ -2.76
SSB-208ENST00000468600 ANK1P16157 1881 aa-2.16□□□□□ -2.76
SSB-208ENST00000468600 KIAA1107Q9UPP5 1409 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 RELNP78509 3460 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 TRBV10-1A0A0K0K1A3 114 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 TMEM189A5PLL7 270 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 CCSMST1Q4G0I0 132 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 TRAPPC5Q8IUR0 188 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 NUBP2Q9Y5Y2 271 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 CHD7Q9P2D1 2997 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 ZNF609O15014 1411 aa-2.17□□□□□ -2.76
SSB-208ENST00000468600 DNAH1Q9P2D7 4330 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 TRAV1-2A0A0B4J238 106 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 C9orf92A6NGG3 77 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 SYS1-DBNDD2H3BUS1 97 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 HMGB3O15347 200 aaKnown RBP-2.18□□□□□ -2.76
SSB-208ENST00000468600 BANF1O75531 89 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 SERPINA1P01009 418 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 ITGB3BPQ13352 177 aaPredicted RBP-2.18□□□□□ -2.76
SSB-208ENST00000468600 ALX1Q15699 326 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 AMELXQ99217 191 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 OR2J1Q9GZK6 312 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 MYO9AB2RTY4 2548 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 ACACBO00763 2458 aa-2.18□□□□□ -2.76
SSB-208ENST00000468600 DYNC1H1Q14204 4646 aaKnown RBP-2.19□□□□□ -2.76
SSB-208ENST00000468600 XIRP1Q702N8 1843 aaKnown RBP-2.19□□□□□ -2.76
SSB-208ENST00000468600 WNK3Q9BYP7 1800 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 LOC107986453A0A1B0GWG9 222 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 CDC42EP2O14613 210 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 IFNA14P01570 189 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 CYBAP13498 195 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 NDUFA6P56556 154 aa-2.19□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms