RNA–Protein interactions for RNA: ENST00000468589.5

DENND1B-207, Transcript of DENN domain containing 1B, humanhuman

TSL 1 (best)

Gene DENND1B, Length 2,141 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-207ENST00000468589 CDKN1BP46527 198 aa18.41■□□□□ 0.54
DENND1B-207ENST00000468589 SPATA12Q7Z6I5 190 aa18.41■□□□□ 0.54
DENND1B-207ENST00000468589 MUC4Q99102 2169 aa18.41■□□□□ 0.54
DENND1B-207ENST00000468589 DUSP14O95147 198 aaKnown RBP18.41■□□□□ 0.54
DENND1B-207ENST00000468589 SCRT2Q9NQ03 307 aa18.41■□□□□ 0.54
DENND1B-207ENST00000468589 CD7P09564 240 aa18.4■□□□□ 0.54
DENND1B-207ENST00000468589 TEX43Q6ZNM6 134 aa18.4■□□□□ 0.54
DENND1B-207ENST00000468589 SMIM15Q7Z3B0 74 aa18.4■□□□□ 0.54
DENND1B-207ENST00000468589 LEPROTL1O95214 131 aa18.39■□□□□ 0.53
DENND1B-207ENST00000468589 PROK1P58294 105 aa18.39■□□□□ 0.53
DENND1B-207ENST00000468589 TSTD3H0UI37 97 aa18.38■□□□□ 0.53
DENND1B-207ENST00000468589 TCF21O43680 179 aa18.38■□□□□ 0.53
DENND1B-207ENST00000468589 TNFRSF6BO95407 300 aa18.38■□□□□ 0.53
DENND1B-207ENST00000468589 MAP6D1Q9H9H5 199 aa18.38■□□□□ 0.53
DENND1B-207ENST00000468589 RBMY1BA6NDE4 496 aaKnown RBP18.38■□□□□ 0.53
DENND1B-207ENST00000468589 RBMY1EA6NEQ0 496 aaKnown RBP18.38■□□□□ 0.53
DENND1B-207ENST00000468589 NDUFA7O95182 113 aa18.38■□□□□ 0.53
DENND1B-207ENST00000468589 RBMY1DP0C7P1 496 aaKnown RBP18.38■□□□□ 0.53
DENND1B-207ENST00000468589 NSUN5P1Q3KNT7 163 aa18.38■□□□□ 0.53
DENND1B-207ENST00000468589 ATOH7Q8N100 152 aa18.38■□□□□ 0.53
DENND1B-207ENST00000468589 C14orf178Q8N769 122 aaPredicted RBP18.38■□□□□ 0.53
DENND1B-207ENST00000468589 BTF3P20290 206 aaKnown RBP18.37■□□□□ 0.53
DENND1B-207ENST00000468589 ZNF256Q9Y2P7 627 aaPredicted RBP18.37■□□□□ 0.53
DENND1B-207ENST00000468589 ADARB2-AS1A8MUL3 147 aa18.37■□□□□ 0.53
DENND1B-207ENST00000468589 H3BMM0 161 aa18.37■□□□□ 0.53
DENND1B-207ENST00000468589 PPBPP02775 128 aa18.37■□□□□ 0.53
DENND1B-207ENST00000468589 KRTAP10-3P60369 221 aa18.37■□□□□ 0.53
DENND1B-207ENST00000468589 A0A096LNJ9 63 aa18.36■□□□□ 0.53
DENND1B-207ENST00000468589 TRAV2A0A0B4J234 112 aa18.36■□□□□ 0.53
DENND1B-207ENST00000468589 TSPOP30536 169 aa18.36■□□□□ 0.53
DENND1B-207ENST00000468589 MDFICQ9P1T7 246 aa18.36■□□□□ 0.53
DENND1B-207ENST00000468589 PAM16Q9Y3D7 125 aa18.36■□□□□ 0.53
DENND1B-207ENST00000468589 RBMY1A1P0DJD3 496 aaKnown RBP18.35■□□□□ 0.53
DENND1B-207ENST00000468589 RBMY1CP0DJD4 496 aa18.35■□□□□ 0.53
DENND1B-207ENST00000468589 HLA-DRB4P13762 266 aa18.35■□□□□ 0.53
DENND1B-207ENST00000468589 RBMY1FQ15415 496 aaKnown RBP18.35■□□□□ 0.53
DENND1B-207ENST00000468589 HLA-DRB4X5D2U9 266 aa18.35■□□□□ 0.53
DENND1B-207ENST00000468589 HIVEP1P15822 2718 aa18.35■□□□□ 0.53
DENND1B-207ENST00000468589 NIPBLQ6KC79 2804 aaeCLIP18.35■□□□□ 0.53
DENND1B-207ENST00000468589 MED14OSP0DP75 135 aa18.35■□□□□ 0.53
DENND1B-207ENST00000468589 JMJD8Q96S16 334 aa18.35■□□□□ 0.53
DENND1B-207ENST00000468589 MCRIP2Q9BUT9 160 aaKnown RBP18.35■□□□□ 0.53
DENND1B-207ENST00000468589 Q8N1Y9 231 aa18.34■□□□□ 0.53
DENND1B-207ENST00000468589 OR2K2Q8NGT1 345 aa18.34■□□□□ 0.53
DENND1B-207ENST00000468589 MAP1LC3AQ9H492 121 aa18.34■□□□□ 0.53
DENND1B-207ENST00000468589 JPT2Q9H910 190 aa18.34■□□□□ 0.53
DENND1B-207ENST00000468589 DDTP30046 118 aa18.34■□□□□ 0.53
DENND1B-207ENST00000468589 CRXO43186 299 aaPredicted RBP18.33■□□□□ 0.52
DENND1B-207ENST00000468589 NRACQ8N912 160 aa18.33■□□□□ 0.52
DENND1B-207ENST00000468589 TMEM70Q9BUB7 260 aa18.33■□□□□ 0.52
DENND1B-207ENST00000468589 FN1P02751 2386 aaKnown RBP18.32■□□□□ 0.52
DENND1B-207ENST00000468589 IGHV3-16A0A0C4DH30 117 aa18.32■□□□□ 0.52
DENND1B-207ENST00000468589 H0Y8G0 127 aa18.32■□□□□ 0.52
DENND1B-207ENST00000468589 SPAG8Q99932 426 aaPredicted RBP18.32■□□□□ 0.52
DENND1B-207ENST00000468589 IGHV1OR15-1A0A075B7D0 117 aa18.32■□□□□ 0.52
DENND1B-207ENST00000468589 OR4C46A6NHA9 309 aa18.32■□□□□ 0.52
DENND1B-207ENST00000468589 PRM2P04554 102 aa18.32■□□□□ 0.52
DENND1B-207ENST00000468589 MAJINQ3KP22 176 aa18.32■□□□□ 0.52
DENND1B-207ENST00000468589 VAMP8Q9BV40 100 aa18.32■□□□□ 0.52
DENND1B-207ENST00000468589 SYS1-DBNDD2H3BUS1 97 aa18.31■□□□□ 0.52
DENND1B-207ENST00000468589 MGPP08493 103 aa18.31■□□□□ 0.52
DENND1B-207ENST00000468589 ODF3L2Q3SX64 289 aa18.31■□□□□ 0.52
DENND1B-207ENST00000468589 HTN1P15515 57 aa18.3■□□□□ 0.52
DENND1B-207ENST00000468589 DPH3P1Q9H4G8 78 aa18.3■□□□□ 0.52
DENND1B-207ENST00000468589 LAMTOR2Q9Y2Q5 125 aa18.3■□□□□ 0.52
DENND1B-207ENST00000468589 NSD1Q96L73 2696 aaPredicted RBP18.3■□□□□ 0.52
DENND1B-207ENST00000468589 KIR2DL5BA0A0G2JN68 375 aa18.29■□□□□ 0.52
DENND1B-207ENST00000468589 KIR2DL5BA0A0G2JPC4 375 aa18.29■□□□□ 0.52
DENND1B-207ENST00000468589 A8MTW9 85 aa18.29■□□□□ 0.52
DENND1B-207ENST00000468589 KIR2DL5AQ8N109 375 aa18.29■□□□□ 0.52
DENND1B-207ENST00000468589 SAP30O75446 220 aa18.29■□□□□ 0.52
DENND1B-207ENST00000468589 ZNF747Q9BV97 191 aa18.29■□□□□ 0.52
DENND1B-207ENST00000468589 NXPH4O95158 308 aa18.28■□□□□ 0.52
DENND1B-207ENST00000468589 LINC00469Q8N7U9 141 aa18.28■□□□□ 0.52
DENND1B-207ENST00000468589 HSPB8Q9UJY1 196 aa18.28■□□□□ 0.52
DENND1B-207ENST00000468589 C9orf85Q96MD7 179 aa18.28■□□□□ 0.52
DENND1B-207ENST00000468589 TRAV25A0A0B4J276 109 aa18.27■□□□□ 0.52
DENND1B-207ENST00000468589 RPL39LQ96EH5 51 aaKnown RBP18.27■□□□□ 0.52
DENND1B-207ENST00000468589 AP1S3Q96PC3 154 aa18.27■□□□□ 0.52
DENND1B-207ENST00000468589 MAP1LC3CQ9BXW4 147 aa18.27■□□□□ 0.52
DENND1B-207ENST00000468589 IGLV2-18A0A075B6J9 118 aa18.26■□□□□ 0.51
DENND1B-207ENST00000468589 A0A087WWL8 130 aa18.26■□□□□ 0.51
DENND1B-207ENST00000468589 MRAP2Q96G30 205 aa18.26■□□□□ 0.51
DENND1B-207ENST00000468589 KIF25-AS1Q9Y6Z4 181 aa18.26■□□□□ 0.51
DENND1B-207ENST00000468589 RASL10AQ92737 203 aa18.26■□□□□ 0.51
DENND1B-207ENST00000468589 PMCHL2Q9BQD1 86 aa18.26■□□□□ 0.51
DENND1B-207ENST00000468589 CBY3A6NI87 242 aa18.25■□□□□ 0.51
DENND1B-207ENST00000468589 LINC00315P59091 139 aa18.25■□□□□ 0.51
DENND1B-207ENST00000468589 NXT2Q9NPJ8 142 aaKnown RBP18.25■□□□□ 0.51
DENND1B-207ENST00000468589 C2CD3Q4AC94 2353 aa18.24■□□□□ 0.51
DENND1B-207ENST00000468589 HBDP02042 147 aa18.24■□□□□ 0.51
DENND1B-207ENST00000468589 SPATA45Q537H7 98 aa18.24■□□□□ 0.51
DENND1B-207ENST00000468589 Q8N8P6 123 aa18.24■□□□□ 0.51
DENND1B-207ENST00000468589 LINC01546A6NGU7 62 aa18.23■□□□□ 0.51
DENND1B-207ENST00000468589 TCAPO15273 167 aa18.23■□□□□ 0.51
DENND1B-207ENST00000468589 DEFA6Q01524 100 aa18.23■□□□□ 0.51
DENND1B-207ENST00000468589 C14orf144Q96I85 54 aa18.23■□□□□ 0.51
DENND1B-207ENST00000468589 C20orf144Q9BQM9 153 aa18.22■□□□□ 0.51
DENND1B-207ENST00000468589 ZNF705AQ6ZN79 300 aaPredicted RBP18.21■□□□□ 0.51
DENND1B-207ENST00000468589 PRSS47A8MTI9 375 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms