RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PRSS47A8MTI9 375 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 FABP5P3A8MUU1 101 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 GNRH2O43555 120 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 NDUFS6O75380 124 aaKnown RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 SCO1O75880 301 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 SNAPINO95295 136 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 CA1P00915 261 aaPredicted RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 P01737 135 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 MT-ND4LP03901 98 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 PRM2P04554 102 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 GZMBP10144 247 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 CDKN1BP46527 198 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TCL1AP56279 114 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 NUTF2P61970 127 aaKnown RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 RPL36AP83881 106 aaKnown RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 RPL19P84098 196 aaKnown RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 RNF212Q495C1 297 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 C10orf91Q5T1B1 145 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 IBA57Q5T440 356 aaKnown RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 FAM162BQ5T6X4 162 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 GFI1BQ5VTD9 330 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 ATRAIDQ6UW56 229 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TRPT1Q86TN4 253 aaKnown RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 SVBPQ8N300 66 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 C15orf54Q8N8G6 183 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 OR2D3Q8NGH3 330 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 MRAPQ8TCY5 172 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 ISOC2Q96AB3 205 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 SFRP2Q96HF1 295 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM208Q9BTX3 173 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TPPP3Q9BW30 176 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 BIN3Q9NQY0 253 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 CARHSP1Q9Y2V2 147 aaKnown RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 LY96Q9Y6Y9 160 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 COL6A5A8TX70 2615 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TRRAPQ9Y4A5 3859 aa2.96□□□□□ -1.93
TMEM39A-204ENST00000468545 AGRNO00468 2067 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 MUC21A0A0G2JKD1 596 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 MUC21A0A140T8X8 626 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 C7orf71A4D174 169 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 B4DEV8 164 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 H7BYZ3 331 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 SPINK4O60575 86 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 CRISP2P16562 243 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 EGFEM1PQ0D2K5 195 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 PNRC1Q12796 327 aaPredicted RBP2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 CFAP161Q6P656 301 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 MORN3Q6PF18 240 aaPredicted RBP2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 FAM159AQ6UWV7 190 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 AMTNQ6UX39 209 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 Q75L30 129 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 ZFAND2AQ8N6M9 145 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 FAM19A4Q96LR4 140 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 OSTCQ9NRP0 149 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 TP53TG3Q9ULZ0 132 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 LENEPQ9Y5L5 61 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 URGCP-MRPS24S4R325 110 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 STAB1Q9NY15 2570 aa2.96□□□□□ -1.94
TMEM39A-204ENST00000468545 ANK2Q01484 3957 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 IGHV1OR15-1A0A075B7D0 117 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 IGKV3D-20A0A0C4DH25 116 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 C19orf71A6NCJ1 209 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 KLLNB2CW77 178 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 K7EIL1 84 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 PPP1R2P9O14990 202 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 CRXO43186 299 aaPredicted RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 ZNF324O75467 553 aaPredicted RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 INSP01308 110 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 AMBPP02760 352 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 PFN1P07737 140 aaKnown RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 FRMD6-AS1P0C7T7 363 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 RBMY1A1P0DJD3 496 aaKnown RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 RBMY1CP0DJD4 496 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 S100A4P26447 101 aaKnown RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 EMP1P54849 157 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 APOC4P55056 127 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 RHEBQ15382 184 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 RBMY1FQ15415 496 aaKnown RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 KRTAP21-3Q3LHN1 58 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 C1orf158Q8N1D5 194 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 SMIM12Q96EX1 92 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 PGLYRP4Q96LB8 373 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 ODF3Q96PU9 254 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 RPP21Q9H633 154 aaKnown RBP2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 GOLT1BQ9Y3E0 138 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 V9GYV3 84 aa2.95□□□□□ -1.94
TMEM39A-204ENST00000468545 NOTCH3Q9UM47 2321 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 TRBV7-9A0A0J9YWB2 115 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 A0A1W2PPQ1 181 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 XKRY2A2RUG3 117 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 A8MTW9 85 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 A8MWL6 223 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 H3BVH4 76 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 DEFB4AO15263 64 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 TYMSP04818 313 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 GIG44P09565 113 aaPredicted RBP2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 ARMS2P0C7Q2 107 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 AZU1P20160 251 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 S100PP25815 95 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms