RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 EIF2B2P49770 351 aaKnown RBP2.62□□□□□ -1.99
HMGB1-207ENST00000468384 MNAT1P51948 309 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 DSCR10P59022 87 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 RAB5BP61020 215 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 RPL23P62829 140 aaKnown RBP2.62□□□□□ -1.99
HMGB1-207ENST00000468384 SPINK13Q1W4C9 94 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
HMGB1-207ENST00000468384 FP248Q71RG6 208 aaPredicted RBP2.62□□□□□ -1.99
HMGB1-207ENST00000468384 BAP18Q8IXM2 172 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 OR4K15Q8NH41 348 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 CMSS1Q9BQ75 279 aaKnown RBP2.62□□□□□ -1.99
HMGB1-207ENST00000468384 TXNDC17Q9BRA2 123 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 SAMD10Q9BYL1 202 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 DCSTAMPQ9H295 470 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 ENY2Q9NPA8 101 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 RPS10P5Q9NQ39 176 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 ENPP4Q9Y6X5 453 aa2.62□□□□□ -1.99
HMGB1-207ENST00000468384 IGHV6-1A0A0B4J1U7 121 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 IGKV2-24A0A0C4DH68 120 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 LOC389332A0A1B0GUA5 103 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 PGPA6NDG6 321 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 IGHV3-53P01767 116 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 GTF2F2P13984 249 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 NPPCP23582 126 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 GZMMP51124 257 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 SLC18A1P54219 525 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 H2BFSP57053 126 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 CDK10Q15131 360 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 PIGYQ3MUY2 71 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 Q499Y3 187 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 C1orf137Q5JT78 98 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 HES5Q5TA89 166 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 CAMK2N1Q7Z7J9 78 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 PRNTQ86SH4 94 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 SAXO1Q8IYX7 474 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 THEM6Q8WUY1 208 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 SFRP2Q96HF1 295 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 BTF3L4Q96K17 158 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 KCNS1Q96KK3 526 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 LINC00477Q96M19 166 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 LINC00052Q96N35 136 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 MRPL32Q9BYC8 188 aaKnown RBP2.61□□□□□ -1.99
HMGB1-207ENST00000468384 PKIGQ9Y2B9 76 aa2.61□□□□□ -1.99
HMGB1-207ENST00000468384 TRAV12-2A0A075B6T6 113 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 IGKV1-9A0A0C4DH69 117 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 TEX50A0A1B0GTY4 177 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 TMEM235A6NFC5 223 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 A8MTW9 85 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 NDUFC2-KCTD14E9PQ53 114 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 M0R1X1 148 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 UPK2O00526 184 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 IFNA1P01562 189 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 MT-ND6P03923 174 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 SAA1P0DJI8 122 aaPredicted RBP2.6□□□□□ -1.99
HMGB1-207ENST00000468384 CXCL5P42830 114 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 NMUP48645 174 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 HERVK_113P61574 105 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 IFITM3Q01628 133 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 SMCO1Q147U7 214 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 EBLN2Q6P2I7 272 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 ZNF880Q6PDB4 577 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 STX19Q8N4C7 294 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 OR4X1Q8NH49 305 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 ZCCHC13Q8WW36 166 aaKnown RBP2.6□□□□□ -1.99
HMGB1-207ENST00000468384 C2orf50Q96LR7 162 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 PYGO2Q9BRQ0 406 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 GNB1LQ9BYB4 327 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 CMTM6Q9NX76 183 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 FUT9Q9Y231 359 aa2.6□□□□□ -1.99
HMGB1-207ENST00000468384 A0A0J9YX75 114 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 K7EIM0 57 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 SRSF10O75494 262 aaKnown RBP2.59□□□□□ -1.99
HMGB1-207ENST00000468384 OR7C1O76099 320 aaPredicted RBP2.59□□□□□ -1.99
HMGB1-207ENST00000468384 GABARAPO95166 117 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 IGLV7-43P04211 117 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 CRYBB3P26998 211 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 GTF2A1P52655 376 aaPredicted RBP2.59□□□□□ -1.99
HMGB1-207ENST00000468384 PRCDQ00LT1 54 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 COX6A2Q02221 97 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 ORMDL2Q53FV1 153 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 CENPWQ5EE01 88 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 LINC01590Q5TEZ4 76 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 SCGB1D4Q6XE38 83 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 FAM19A3Q7Z5A8 133 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 SLC35G3Q8N808 338 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 OR9I1Q8NGQ6 314 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 OTOSQ8NHW6 89 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 TNFAIP8L1Q8WVP5 186 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 MAFIPQ8WZ33 124 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 DIRAS2Q96HU8 199 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 TBX5Q99593 518 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 TIMM17AQ99595 171 aa2.59□□□□□ -1.99
HMGB1-207ENST00000468384 HDHD3Q9BSH5 251 aaPredicted RBP2.59□□□□□ -1.99
HMGB1-207ENST00000468384 UTP11Q9Y3A2 253 aaKnown RBP2.59□□□□□ -1.99
HMGB1-207ENST00000468384 KLLNB2CW77 178 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 GPR31O00270 319 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 ARPC5O15511 151 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 CYB5BO43169 146 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 ATG12O94817 140 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 SPI1P17947 270 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms