RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 FAM30AQ9NZY2 134 aa11.49□□□□□ -0.57
TRIM56-203ENST00000467847 GCHFRP30047 84 aa11.48□□□□□ -0.57
TRIM56-203ENST00000467847 DEFA1P59665 94 aa11.48□□□□□ -0.57
TRIM56-203ENST00000467847 DEFA3P59666 94 aa11.48□□□□□ -0.57
TRIM56-203ENST00000467847 SMUG1Q53HV7 270 aa11.48□□□□□ -0.57
TRIM56-203ENST00000467847 PRNTQ86SH4 94 aa11.48□□□□□ -0.57
TRIM56-203ENST00000467847 HSD17B11Q8NBQ5 300 aa11.48□□□□□ -0.57
TRIM56-203ENST00000467847 RAB24Q969Q5 203 aa11.48□□□□□ -0.57
TRIM56-203ENST00000467847 IGLV2-11P01706 119 aa11.47□□□□□ -0.57
TRIM56-203ENST00000467847 C1QBP02746 253 aa11.47□□□□□ -0.57
TRIM56-203ENST00000467847 RNASE3P12724 160 aaKnown RBP11.47□□□□□ -0.57
TRIM56-203ENST00000467847 FLI1Q01543 452 aaPredicted RBP11.47□□□□□ -0.57
TRIM56-203ENST00000467847 Q8N3U1 123 aa11.47□□□□□ -0.57
TRIM56-203ENST00000467847 OR2G3Q8NGZ4 309 aa11.47□□□□□ -0.57
TRIM56-203ENST00000467847 SUN5Q8TC36 379 aa11.47□□□□□ -0.57
TRIM56-203ENST00000467847 EPDR1Q9UM22 224 aa11.47□□□□□ -0.57
TRIM56-203ENST00000467847 GGTLC3B5MD39 225 aa11.46□□□□□ -0.57
TRIM56-203ENST00000467847 SUMO1P63165 101 aaKnown RBP11.46□□□□□ -0.57
TRIM56-203ENST00000467847 WFDC2Q14508 124 aa11.46□□□□□ -0.57
TRIM56-203ENST00000467847 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.57
TRIM56-203ENST00000467847 SH3BGRL3Q9H299 93 aa11.46□□□□□ -0.57
TRIM56-203ENST00000467847 UBR4Q5T4S7 5183 aa11.46□□□□□ -0.58
TRIM56-203ENST00000467847 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 GAGE1Q13065 139 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 GAGE4Q13068 117 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 GAGE5Q13069 117 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 SAPCD1Q5SSQ6 148 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 ZFP2Q6ZN57 461 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 PSMG3Q9BT73 122 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-203ENST00000467847 PARLQ9H300 379 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 TMEM167BQ9NRX6 74 aa11.45□□□□□ -0.58
TRIM56-203ENST00000467847 TRAV8-3A0A0A6YYJ7 113 aa11.44□□□□□ -0.58
TRIM56-203ENST00000467847 A8MWV9 139 aa11.44□□□□□ -0.58
TRIM56-203ENST00000467847 LECT2O14960 151 aa11.44□□□□□ -0.58
TRIM56-203ENST00000467847 MBP02144 154 aa11.44□□□□□ -0.58
TRIM56-203ENST00000467847 S100A4P26447 101 aaKnown RBP11.44□□□□□ -0.58
TRIM56-203ENST00000467847 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
TRIM56-203ENST00000467847 CXorf1O96002 111 aa11.43□□□□□ -0.58
TRIM56-203ENST00000467847 PLA2G1BP04054 148 aaKnown RBP11.43□□□□□ -0.58
TRIM56-203ENST00000467847 LINC00694P0DN24 101 aa11.43□□□□□ -0.58
TRIM56-203ENST00000467847 ATP6V0CP27449 155 aa11.43□□□□□ -0.58
TRIM56-203ENST00000467847 TOR2AQ5JU69 321 aa11.43□□□□□ -0.58
TRIM56-203ENST00000467847 DAZ4Q86SG3 579 aaKnown RBP11.43□□□□□ -0.58
TRIM56-203ENST00000467847 OR2T35Q8NGX2 323 aa11.43□□□□□ -0.58
TRIM56-203ENST00000467847 DAZ3Q9NR90 486 aaKnown RBP11.43□□□□□ -0.58
TRIM56-203ENST00000467847 IGKV3D-20A0A0C4DH25 116 aa11.42□□□□□ -0.58
TRIM56-203ENST00000467847 ASIPP42127 132 aa11.42□□□□□ -0.58
TRIM56-203ENST00000467847 SERF2P84101 59 aa11.42□□□□□ -0.58
TRIM56-203ENST00000467847 PIK3CD-AS1Q5SR53 167 aa11.42□□□□□ -0.58
TRIM56-203ENST00000467847 Q6ZSA8 131 aa11.42□□□□□ -0.58
TRIM56-203ENST00000467847 SYT8Q8NBV8 401 aa11.42□□□□□ -0.58
TRIM56-203ENST00000467847 ACTR3CQ9C0K3 210 aaPredicted RBP11.42□□□□□ -0.58
TRIM56-203ENST00000467847 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.41□□□□□ -0.58
TRIM56-203ENST00000467847 A0A087WWC5 75 aa11.41□□□□□ -0.58
TRIM56-203ENST00000467847 TRAV34A0A0B4J273 112 aa11.41□□□□□ -0.58
TRIM56-203ENST00000467847 LINC00479Q96M42 142 aa11.41□□□□□ -0.58
TRIM56-203ENST00000467847 AQP10Q96PS8 301 aa11.41□□□□□ -0.58
TRIM56-203ENST00000467847 JPT2Q9H910 190 aa11.41□□□□□ -0.58
TRIM56-203ENST00000467847 Q9UF83 564 aa11.41□□□□□ -0.58
TRIM56-203ENST00000467847 FGF8P55075 233 aaPredicted RBP11.4□□□□□ -0.58
TRIM56-203ENST00000467847 LINC00528Q8N1L1 170 aa11.4□□□□□ -0.58
TRIM56-203ENST00000467847 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
TRIM56-203ENST00000467847 SAMD10Q9BYL1 202 aa11.4□□□□□ -0.58
TRIM56-203ENST00000467847 TNFSF18Q9UNG2 199 aa11.4□□□□□ -0.58
TRIM56-203ENST00000467847 ALG5Q9Y673 324 aa11.4□□□□□ -0.58
TRIM56-203ENST00000467847 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.58
TRIM56-203ENST00000467847 A0A1W2PRE2 83 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 FABP5P3A8MUU1 101 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 IFNA7P01567 189 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 UFSP1Q6NVU6 142 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 IL36BQ9NZH7 164 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 COX11Q9Y6N1 276 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
TRIM56-203ENST00000467847 A6NHS1 94 aa11.38□□□□□ -0.59
TRIM56-203ENST00000467847 B4DEV8 164 aa11.38□□□□□ -0.59
TRIM56-203ENST00000467847 H3BVH4 76 aa11.38□□□□□ -0.59
TRIM56-203ENST00000467847 DMRTA1Q5VZB9 504 aa11.38□□□□□ -0.59
TRIM56-203ENST00000467847 RMI2Q96E14 147 aa11.38□□□□□ -0.59
TRIM56-203ENST00000467847 RHODO00212 210 aa11.37□□□□□ -0.59
TRIM56-203ENST00000467847 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
TRIM56-203ENST00000467847 Q86TA4 180 aa11.37□□□□□ -0.59
TRIM56-203ENST00000467847 PEX7O00628 323 aa11.36□□□□□ -0.59
TRIM56-203ENST00000467847 UBE2G2P60604 165 aa11.36□□□□□ -0.59
TRIM56-203ENST00000467847 FAM74A4Q5TZK3 123 aa11.36□□□□□ -0.59
TRIM56-203ENST00000467847 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 RBFOX3A6NFN3 312 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 KRBOX1C9JBD0 128 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 M0R036 132 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 ARMS2P0C7Q2 107 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 SEC11BP0C7V7 166 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 SCXQ7RTU7 201 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 NIT1Q86X76 327 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 Q8N976 141 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 OR11H4Q8NGC9 324 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 DEFB104AQ8WTQ1 72 aa11.35□□□□□ -0.59
TRIM56-203ENST00000467847 ZC2HC1AQ96GY0 325 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms