RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 Q8N814 137 aa14.08□□□□□ -0.16
COL9A3-207ENST00000467819 SUN5Q8TC36 379 aa14.08□□□□□ -0.16
COL9A3-207ENST00000467819 ALG5Q9Y673 324 aa14.08□□□□□ -0.16
COL9A3-207ENST00000467819 GGTLC3B5MD39 225 aa14.07□□□□□ -0.16
COL9A3-207ENST00000467819 IGLV2-11P01706 119 aa14.07□□□□□ -0.16
COL9A3-207ENST00000467819 ATP6V0CP27449 155 aa14.07□□□□□ -0.16
COL9A3-207ENST00000467819 ATP6V0E2Q8NHE4 81 aa14.07□□□□□ -0.16
COL9A3-207ENST00000467819 PSMG3Q9BT73 122 aaPredicted RBP14.07□□□□□ -0.16
COL9A3-207ENST00000467819 EPDR1Q9UM22 224 aa14.07□□□□□ -0.16
COL9A3-207ENST00000467819 BOLA1Q9Y3E2 137 aa14.07□□□□□ -0.16
COL9A3-207ENST00000467819 FAM229AH3BQW9 127 aa14.06□□□□□ -0.16
COL9A3-207ENST00000467819 MGST1P10620 155 aaKnown RBP14.06□□□□□ -0.16
COL9A3-207ENST00000467819 RNASE3P12724 160 aaKnown RBP14.06□□□□□ -0.16
COL9A3-207ENST00000467819 CYB561D1Q8N8Q1 229 aa14.06□□□□□ -0.16
COL9A3-207ENST00000467819 TMEM70Q9BUB7 260 aa14.06□□□□□ -0.16
COL9A3-207ENST00000467819 GTSF1LQ9H1H1 148 aa14.06□□□□□ -0.16
COL9A3-207ENST00000467819 SH3BGRL3Q9H299 93 aa14.05□□□□□ -0.16
COL9A3-207ENST00000467819 TMEM167BQ9NRX6 74 aa14.05□□□□□ -0.16
COL9A3-207ENST00000467819 CXorf1O96002 111 aa14.04□□□□□ -0.16
COL9A3-207ENST00000467819 MBP02144 154 aa14.04□□□□□ -0.16
COL9A3-207ENST00000467819 Q8N3U1 123 aa14.04□□□□□ -0.16
COL9A3-207ENST00000467819 PTH2Q96A98 100 aa14.04□□□□□ -0.16
COL9A3-207ENST00000467819 S100A4P26447 101 aaKnown RBP14.03□□□□□ -0.16
COL9A3-207ENST00000467819 SERF2P84101 59 aa14.03□□□□□ -0.16
COL9A3-207ENST00000467819 Q6ZSN1 163 aa14.03□□□□□ -0.16
COL9A3-207ENST00000467819 AQP10Q96PS8 301 aa14.03□□□□□ -0.16
COL9A3-207ENST00000467819 ACTR3CQ9C0K3 210 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-207ENST00000467819 PARLQ9H300 379 aa14.03□□□□□ -0.16
COL9A3-207ENST00000467819 TRAV34A0A0B4J273 112 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 GAGE12JA6NER3 117 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 GAGE1Q13065 139 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 GAGE4Q13068 117 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 GAGE5Q13069 117 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 LAGE3Q14657 143 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 LGALSLQ3ZCW2 172 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-207ENST00000467819 GAGE13Q4V321 117 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 SAPCD1Q5SSQ6 148 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 LINC00479Q96M42 142 aa14.02□□□□□ -0.17
COL9A3-207ENST00000467819 IGKV3D-20A0A0C4DH25 116 aa14.01□□□□□ -0.17
COL9A3-207ENST00000467819 WFDC2Q14508 124 aa14.01□□□□□ -0.17
COL9A3-207ENST00000467819 TM2D2Q9BX73 214 aa14.01□□□□□ -0.17
COL9A3-207ENST00000467819 FAM30AQ9NZY2 134 aa14.01□□□□□ -0.17
COL9A3-207ENST00000467819 A8MWV9 139 aa14□□□□□ -0.17
COL9A3-207ENST00000467819 OR2T35Q8NGX2 323 aa14□□□□□ -0.17
COL9A3-207ENST00000467819 TNFSF18Q9UNG2 199 aa14□□□□□ -0.17
COL9A3-207ENST00000467819 ARL2-SNX15V9GYD0 113 aa14□□□□□ -0.17
COL9A3-207ENST00000467819 IFNA7P01567 189 aa13.99□□□□□ -0.17
COL9A3-207ENST00000467819 ASIPP42127 132 aa13.99□□□□□ -0.17
COL9A3-207ENST00000467819 ZFP2Q6ZN57 461 aa13.99□□□□□ -0.17
COL9A3-207ENST00000467819 MED28Q9H204 178 aa13.99□□□□□ -0.17
COL9A3-207ENST00000467819 JPT2Q9H910 190 aa13.99□□□□□ -0.17
COL9A3-207ENST00000467819 A0A1W2PRE2 83 aa13.98□□□□□ -0.17
COL9A3-207ENST00000467819 LECT2O14960 151 aa13.98□□□□□ -0.17
COL9A3-207ENST00000467819 LINC00694P0DN24 101 aa13.98□□□□□ -0.17
COL9A3-207ENST00000467819 UBE2G2P60604 165 aa13.98□□□□□ -0.17
COL9A3-207ENST00000467819 Q5BKY6 102 aa13.98□□□□□ -0.17
COL9A3-207ENST00000467819 DAZ4Q86SG3 579 aaKnown RBP13.98□□□□□ -0.17
COL9A3-207ENST00000467819 DAZ3Q9NR90 486 aaKnown RBP13.98□□□□□ -0.17
COL9A3-207ENST00000467819 Q9UF83 564 aa13.98□□□□□ -0.17
COL9A3-207ENST00000467819 FABP5P3A8MUU1 101 aa13.97□□□□□ -0.17
COL9A3-207ENST00000467819 RPL7L1Q6DKI1 246 aaKnown RBP13.97□□□□□ -0.17
COL9A3-207ENST00000467819 C14orf178Q8N769 122 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-207ENST00000467819 SAMD10Q9BYL1 202 aa13.97□□□□□ -0.17
COL9A3-207ENST00000467819 B4DEV8 164 aa13.96□□□□□ -0.17
COL9A3-207ENST00000467819 H3BVH4 76 aa13.96□□□□□ -0.17
COL9A3-207ENST00000467819 PEX7O00628 323 aa13.96□□□□□ -0.17
COL9A3-207ENST00000467819 ZNF726P1Q15940 193 aa13.96□□□□□ -0.17
COL9A3-207ENST00000467819 PIK3CD-AS1Q5SR53 167 aa13.96□□□□□ -0.17
COL9A3-207ENST00000467819 Q86TA4 180 aa13.96□□□□□ -0.17
COL9A3-207ENST00000467819 TRAV8-3A0A0A6YYJ7 113 aa13.95□□□□□ -0.18
COL9A3-207ENST00000467819 DMRTA1Q5VZB9 504 aa13.95□□□□□ -0.18
COL9A3-207ENST00000467819 INO80EQ8NBZ0 244 aaPredicted RBP13.95□□□□□ -0.18
COL9A3-207ENST00000467819 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
COL9A3-207ENST00000467819 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.94□□□□□ -0.18
COL9A3-207ENST00000467819 CTXND1A0A1B0GTU2 59 aa13.94□□□□□ -0.18
COL9A3-207ENST00000467819 M0R036 132 aa13.94□□□□□ -0.18
COL9A3-207ENST00000467819 FGF8P55075 233 aaPredicted RBP13.94□□□□□ -0.18
COL9A3-207ENST00000467819 UFSP1Q6NVU6 142 aa13.94□□□□□ -0.18
COL9A3-207ENST00000467819 FXYD6-FXYD2A0A087WZ82 144 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 BORCS7-ASMTA0A0B4J1R7 106 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 RNF222A6NCQ9 220 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 C1QBP02746 253 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 TOR2AQ5JU69 321 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 FAM74A4Q5TZK3 123 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 SYT8Q8NBV8 401 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 ZC2HC1AQ96GY0 325 aa13.93□□□□□ -0.18
COL9A3-207ENST00000467819 A0A087WWC5 75 aa13.92□□□□□ -0.18
COL9A3-207ENST00000467819 GRIFINA4D1Z8 144 aa13.92□□□□□ -0.18
COL9A3-207ENST00000467819 PTTG1O95997 202 aa13.92□□□□□ -0.18
COL9A3-207ENST00000467819 GIPP09681 153 aaPredicted RBP13.92□□□□□ -0.18
COL9A3-207ENST00000467819 ARMS2P0C7Q2 107 aa13.92□□□□□ -0.18
COL9A3-207ENST00000467819 FAM74A7A6NL05 159 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 KRBOX1C9JBD0 128 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 RHODO00212 210 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 SH2D1AO60880 128 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 CRIP1P50238 77 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 OR11H4Q8NGC9 324 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 URGCP-MRPS24S4R325 110 aa13.91□□□□□ -0.18
COL9A3-207ENST00000467819 A0A087WWL8 130 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms