RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ACYP1P07311 99 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 SSR2P43308 183 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 TDRG1Q3Y452 100 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 SPRNQ5BIV9 151 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 FP248Q71RG6 208 aaPredicted RBP2.1□□□□□ -2.07
VPS50-209ENST00000467326 SBSPONQ8IVN8 264 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 FAM19A2Q8N3H0 131 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 DSCR8Q96T75 97 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 DPH3P1Q9H4G8 78 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 BCORL1Q5H9F3 1711 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 ANKRD26Q9UPS8 1709 aa2.1□□□□□ -2.07
VPS50-209ENST00000467326 PXDNLA1KZ92 1463 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 NCOA2Q15596 1464 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 NUP205Q92621 2012 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 PRDM15P57071 1507 aaPredicted RBP2.09□□□□□ -2.07
VPS50-209ENST00000467326 RBAKDNA6NC62 111 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 NAP1L6A6NFF2 107 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 B4DSR2 109 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 IGKCP01834 107 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 CXCL8P10145 99 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 GNG11P61952 73 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 ZNF791Q3KP31 576 aaPredicted RBP2.09□□□□□ -2.07
VPS50-209ENST00000467326 SPATA45Q537H7 98 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 PYDC2Q56P42 97 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 Q8N8P6 123 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 FAM213BQ8TBF2 198 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 MYOZ3Q8TDC0 251 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 TMEM141Q96I45 108 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 Q9BRP9 147 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 R4GN34 69 aa2.09□□□□□ -2.07
VPS50-209ENST00000467326 PHIPQ8WWQ0 1821 aa2.09□□□□□ -2.08
VPS50-209ENST00000467326 C10orf71Q711Q0 1435 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 SCN1AP35498 2009 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 NLRP1Q9C000 1473 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 MLH3Q9UHC1 1453 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 DOCK8Q8NF50 2099 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 C7orf77A4D0Y5 90 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 ODF3BA8MYP8 253 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 BVES-AS1Q5T3Y7 98 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 COMMD6Q7Z4G1 85 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 C4orf3Q8WVX3 66 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 TRGV9Q99603 122 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 NDUFA12Q9UI09 145 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 LHFPL6Q9Y693 200 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 NCKAP5O14513 1909 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 COL1A2P08123 1366 aa2.08□□□□□ -2.08
VPS50-209ENST00000467326 KIF26AQ9ULI4 1882 aaPredicted RBP2.07□□□□□ -2.08
VPS50-209ENST00000467326 DUOX2Q9NRD8 1548 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 KIF21AQ7Z4S6 1674 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 IGLV2-18A0A075B6J9 118 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 TRAV17A0A0B4J275 112 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 IBA57-AS1B1ANH7 110 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 UMAD1C9J7I0 102 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 SMIM13P0DJ93 91 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 SNRPFP62306 86 aaKnown RBP2.07□□□□□ -2.08
VPS50-209ENST00000467326 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 INSL4Q14641 139 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 MPV17LQ2QL34 196 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 Q6ZTI0 123 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 LYPD1Q8N2G4 141 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 SERP2Q8N6R1 65 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 C18orf32Q8TCD1 76 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 SPHKAPQ2M3C7 1700 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 SLIT3O75094 1523 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 EPRSP07814 1512 aaKnown RBP2.07□□□□□ -2.08
VPS50-209ENST00000467326 UGGT2Q9NYU1 1516 aa2.07□□□□□ -2.08
VPS50-209ENST00000467326 KIF13AQ9H1H9 1805 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 NYNRINQ9P2P1 1898 aaKnown RBP2.06□□□□□ -2.08
VPS50-209ENST00000467326 MUC21A0A140T8X8 626 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 SYS1-DBNDD2H3BUS1 97 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 H3BUT2 72 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 BCE1O60756 84 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 SFTA3P0C7M3 94 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 RBM3P98179 157 aaKnown RBP2.06□□□□□ -2.08
VPS50-209ENST00000467326 ELOBQ15370 118 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 ETDBQ3ZM63 59 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 DEFB134Q4QY38 66 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 S100A7L2Q5SY68 101 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 SLC48A1Q6P1K1 146 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 CLECL1Q8IZS7 167 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 C20orf78Q9BR46 151 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 NXT2Q9NPJ8 142 aaKnown RBP2.06□□□□□ -2.08
VPS50-209ENST00000467326 MRPL35Q9NZE8 188 aaKnown RBP2.06□□□□□ -2.08
VPS50-209ENST00000467326 AKAP11Q9UKA4 1901 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 IQSEC2Q5JU85 1478 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 PXDNQ92626 1479 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 ABCC1P33527 1531 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 ZC3H13Q5T200 1668 aaKnown RBP2.06□□□□□ -2.08
VPS50-209ENST00000467326 USP54Q70EL1 1684 aa2.06□□□□□ -2.08
VPS50-209ENST00000467326 WDR90Q96KV7 1748 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 MYO5AQ9Y4I1 1855 aaKnown RBP2.05□□□□□ -2.08
VPS50-209ENST00000467326 PCM1Q15154 2024 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 IGKV3D-11A0A0A0MRZ8 115 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 A0A0D9SFI3 127 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 CRYM-AS1A6NIL9 109 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 SIX6O95475 246 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 UBE2G1P62253 170 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 MOBPQ13875 183 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 RHOHQ15669 191 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms