RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 RNF185Q96GF1 192 aa11.82□□□□□ -0.52
SNED1-208ENST00000466618 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 XGP55808 180 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 NFE4Q86UQ8 179 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 RNF183Q96D59 192 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 MAP1LC3AQ9H492 121 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
SNED1-208ENST00000466618 M0R3E3 92 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 HES1Q14469 280 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 Q6ZUT4 128 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 TMEM86BQ8N661 226 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 NPBQ8NG41 125 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 ERG28Q9UKR5 140 aa11.81□□□□□ -0.52
SNED1-208ENST00000466618 AGRNO00468 2067 aa11.8□□□□□ -0.52
SNED1-208ENST00000466618 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
SNED1-208ENST00000466618 CNTFRP26992 372 aa11.8□□□□□ -0.52
SNED1-208ENST00000466618 MORN3Q6PF18 240 aaPredicted RBP11.8□□□□□ -0.52
SNED1-208ENST00000466618 OR11H1Q8NG94 326 aa11.8□□□□□ -0.52
SNED1-208ENST00000466618 OR11H2Q8NH07 326 aa11.8□□□□□ -0.52
SNED1-208ENST00000466618 TEP1Q99973 2627 aaKnown RBP11.8□□□□□ -0.52
SNED1-208ENST00000466618 NDUFA3O95167 84 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 TWIST1Q15672 202 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 TMEM190Q8WZ59 177 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 ESM1Q9NQ30 184 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 VPREB3Q9UKI3 123 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 CRYGBP07316 175 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 TMEM219Q86XT9 240 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 HIST1H4GQ99525 98 aa11.79□□□□□ -0.52
SNED1-208ENST00000466618 MRPS12O15235 138 aaKnown RBP11.78□□□□□ -0.52
SNED1-208ENST00000466618 ATP5LO75964 103 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 HILS1P60008 231 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 LY6EQ16553 131 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 LYPD1Q8N2G4 141 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 TMEM158Q8WZ71 300 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 MRPL35Q9NZE8 188 aaKnown RBP11.78□□□□□ -0.52
SNED1-208ENST00000466618 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 H3BRN7 92 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 NBR2O15453 112 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 Q8N9W7 124 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 SS18L2Q9UHA2 77 aa11.78□□□□□ -0.52
SNED1-208ENST00000466618 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
SNED1-208ENST00000466618 EGR2P11161 476 aaPredicted RBP11.77□□□□□ -0.53
SNED1-208ENST00000466618 RPL27AP46776 148 aaKnown RBP11.77□□□□□ -0.53
SNED1-208ENST00000466618 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
SNED1-208ENST00000466618 MSRB1Q9NZV6 116 aa11.77□□□□□ -0.53
SNED1-208ENST00000466618 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.53
SNED1-208ENST00000466618 PGPEP1Q9NXJ5 209 aa11.77□□□□□ -0.53
SNED1-208ENST00000466618 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
SNED1-208ENST00000466618 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
SNED1-208ENST00000466618 CFAP161Q6P656 301 aa11.76□□□□□ -0.53
SNED1-208ENST00000466618 C5orf56Q8N8D9 126 aa11.76□□□□□ -0.53
SNED1-208ENST00000466618 DUX5Q96PT3 197 aa11.76□□□□□ -0.53
SNED1-208ENST00000466618 SIGLEC9Q9Y336 463 aa11.76□□□□□ -0.53
SNED1-208ENST00000466618 MOB4Q9Y3A3 225 aa11.76□□□□□ -0.53
SNED1-208ENST00000466618 LINC01619G3V211 115 aa11.75□□□□□ -0.53
SNED1-208ENST00000466618 FBXL15Q9H469 300 aa11.75□□□□□ -0.53
SNED1-208ENST00000466618 NF1P21359 2839 aa11.75□□□□□ -0.53
SNED1-208ENST00000466618 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
SNED1-208ENST00000466618 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
SNED1-208ENST00000466618 GATA1P15976 413 aaPredicted RBP11.75□□□□□ -0.53
SNED1-208ENST00000466618 COX8CQ7Z4L0 72 aa11.75□□□□□ -0.53
SNED1-208ENST00000466618 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
SNED1-208ENST00000466618 RASL11BQ9BPW5 248 aa11.75□□□□□ -0.53
SNED1-208ENST00000466618 I3L2K1 104 aa11.74□□□□□ -0.53
SNED1-208ENST00000466618 PPP1R27Q86WC6 154 aa11.74□□□□□ -0.53
SNED1-208ENST00000466618 DLX4Q92988 240 aaPredicted RBP11.74□□□□□ -0.53
SNED1-208ENST00000466618 A6NJY4 79 aa11.74□□□□□ -0.53
SNED1-208ENST00000466618 TEX22C9J3V5 150 aa11.74□□□□□ -0.53
SNED1-208ENST00000466618 RNASE1P07998 156 aaKnown RBP11.74□□□□□ -0.53
SNED1-208ENST00000466618 ZNF80P51504 273 aaPredicted RBP11.74□□□□□ -0.53
SNED1-208ENST00000466618 PTH2Q96A98 100 aa11.73□□□□□ -0.53
SNED1-208ENST00000466618 A0A087WX48 190 aa11.72□□□□□ -0.53
SNED1-208ENST00000466618 LINC01548A6NM66 108 aa11.72□□□□□ -0.53
SNED1-208ENST00000466618 Q8N8P6 123 aa11.72□□□□□ -0.53
SNED1-208ENST00000466618 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
SNED1-208ENST00000466618 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
SNED1-208ENST00000466618 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
SNED1-208ENST00000466618 BLCAPP62952 87 aa11.72□□□□□ -0.53
SNED1-208ENST00000466618 PRR25Q96S07 402 aa11.72□□□□□ -0.53
SNED1-208ENST00000466618 ZNF491Q8N8L2 437 aa11.71□□□□□ -0.53
SNED1-208ENST00000466618 IGHV7-81A0A0B4J1V7 117 aa11.71□□□□□ -0.54
SNED1-208ENST00000466618 PRSS29PA6NIE9 313 aa11.71□□□□□ -0.54
SNED1-208ENST00000466618 PLGLAQ15195 96 aa11.71□□□□□ -0.54
SNED1-208ENST00000466618 PPDPFLQ8WWR9 84 aa11.71□□□□□ -0.54
SNED1-208ENST00000466618 ANAPC13Q9BS18 74 aa11.71□□□□□ -0.54
SNED1-208ENST00000466618 MYMXA0A1B0GTQ4 84 aa11.7□□□□□ -0.54
SNED1-208ENST00000466618 IL4P05112 153 aa11.7□□□□□ -0.54
SNED1-208ENST00000466618 Q6ZS46 218 aa11.7□□□□□ -0.54
SNED1-208ENST00000466618 GAGE5Q13069 117 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 GAGE6Q13070 117 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 PDE6HQ13956 83 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 Q8TAT8 98 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 RNF125Q96EQ8 232 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 AAMDCQ9H7C9 122 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms