RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 HOXA5P20719 270 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 RPS20P60866 119 aaKnown RBP10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 FAM74A3Q4VXF1 159 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 OR2D3Q8NGH3 330 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 NDUFAF3Q9BU61 184 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 APLNQ9ULZ1 77 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 TRAV4A0A0B4J268 109 aa10.16□□□□□ -0.78
DNMT3A-208ENST00000466601 MED14OSP0DP75 135 aa10.16□□□□□ -0.78
DNMT3A-208ENST00000466601 TMEM88Q6PEY1 159 aa10.16□□□□□ -0.78
DNMT3A-208ENST00000466601 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
DNMT3A-208ENST00000466601 OR4C5Q8NGB2 326 aa10.16□□□□□ -0.78
DNMT3A-208ENST00000466601 SCRT2Q9NQ03 307 aa10.16□□□□□ -0.78
DNMT3A-208ENST00000466601 PLECQ15149 4684 aaKnown RBP10.16□□□□□ -0.78
DNMT3A-208ENST00000466601 SFTA3P0C7M3 94 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 TMEM241Q24JQ0 296 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 SOHLH1Q5JUK2 328 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 LINC01551Q86U37 167 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 SYT8Q8NBV8 401 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 ZNF479Q96JC4 524 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 RNASE7Q9H1E1 156 aaKnown RBP10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 PHLDA3Q9Y5J5 127 aa10.15□□□□□ -0.78
DNMT3A-208ENST00000466601 MUC4Q99102 2169 aa10.15□□□□□ -0.79
DNMT3A-208ENST00000466601 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
DNMT3A-208ENST00000466601 RS1O15537 224 aa10.14□□□□□ -0.79
DNMT3A-208ENST00000466601 GZMBP10144 247 aa10.14□□□□□ -0.79
DNMT3A-208ENST00000466601 FHL2Q14192 279 aa10.14□□□□□ -0.79
DNMT3A-208ENST00000466601 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
DNMT3A-208ENST00000466601 FAM231DQ6ZW35 169 aa10.14□□□□□ -0.79
DNMT3A-208ENST00000466601 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
DNMT3A-208ENST00000466601 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 TRGV4A0A0C4DH28 118 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 A0A0J9YY99 117 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 M0R381 172 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 SNAI2O43623 268 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 OR5AL1P0C617 328 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 ZFP82Q8N141 532 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 C15orf53Q8NAA6 179 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 SSBP4Q9BWG4 385 aaPredicted RBP10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 NAT8Q9UHE5 227 aa10.13□□□□□ -0.79
DNMT3A-208ENST00000466601 GATCO43716 136 aaKnown RBP10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 CIDEAO60543 219 aa10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 ERVFC1-1P60608 527 aa10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 RPL23P62829 140 aaKnown RBP10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 SLAQ13239 276 aa10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 FER1L6-AS1Q8NA97 138 aa10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 HHLA3Q9XRX5 114 aa10.12□□□□□ -0.79
DNMT3A-208ENST00000466601 A8MWV9 139 aa10.11□□□□□ -0.79
DNMT3A-208ENST00000466601 NUDT3O95989 172 aa10.11□□□□□ -0.79
DNMT3A-208ENST00000466601 IGLC6P0CF74 106 aa10.11□□□□□ -0.79
DNMT3A-208ENST00000466601 OR10AG1Q8NH19 301 aa10.11□□□□□ -0.79
DNMT3A-208ENST00000466601 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
DNMT3A-208ENST00000466601 TPPP3Q9BW30 176 aa10.11□□□□□ -0.79
DNMT3A-208ENST00000466601 JPT2Q9H910 190 aa10.11□□□□□ -0.79
DNMT3A-208ENST00000466601 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 MUC21A0A0G2JKD1 596 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 MUC21A0A140T8X8 626 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 LCE6AA0A183 80 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 H3BNG1 76 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 PAX4O43316 350 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 CRYBA4P53673 196 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 ADIRFQ15847 76 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 SPANXN1Q5VSR9 72 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 UQCC3Q6UW78 93 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 ISOC2Q96AB3 205 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 SFRP2Q96HF1 295 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 OSTCQ9NRP0 149 aa10.1□□□□□ -0.79
DNMT3A-208ENST00000466601 A0A1W2PPQ1 181 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 F2Z2F3 143 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 NXPH4O95158 308 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 SSTP61278 116 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 LGALS9CQ6DKI2 356 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 LINC00476Q8WZB0 136 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 SAMD10Q9BYL1 202 aa10.09□□□□□ -0.79
DNMT3A-208ENST00000466601 LINC00862A6NCI5 91 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 A8MWL6 223 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 LY6G6CO95867 125 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 CACNG7P62955 275 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 CT83Q5H943 113 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 LYZL1Q6UWQ5 148 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 ZFP2Q6ZN57 461 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 COMMD7Q86VX2 200 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
DNMT3A-208ENST00000466601 KMT2CQ8NEZ4 4911 aaKnown RBP10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 A0A087WWL8 130 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 RHODO00212 210 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 CRYGDP07320 174 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 P0DMU3 169 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 FAM231AP0DMU4 169 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 FAM231CP0DMU5 169 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 UFSP1Q6NVU6 142 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 OR10G8Q8NGN5 311 aa10.07□□□□□ -0.8
DNMT3A-208ENST00000466601 CTRLP40313 264 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 237.3 ms