RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 EDF1O60869 148 aaKnown RBP1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 TNFP01375 233 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 IGHV3-33P01772 117 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 HIST1H1DP16402 221 aaKnown RBP1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 ADCYAP1P18509 176 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 GNG4P50150 75 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 CASC2Q6XLA1 102 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 COPS9Q8WXC6 57 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 PPP3R2Q96LZ3 170 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 LINC00052Q96N35 136 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 IER3IP1Q9Y5U9 82 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 NAIPQ13075 1403 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 NRKQ7Z2Y5 1582 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 SPHKAPQ2M3C7 1700 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 ANKRD26Q9UPS8 1709 aa1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 TNRC6AQ8NDV7 1962 aaKnown RBP1.28□□□□□ -2.2
CDC42BPA-211ENST00000466538 PHRF1Q9P1Y6 1649 aaKnown RBP1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 TRBV6-8A0A0A6YYG3 113 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 C20orf202A1L168 122 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 ZNF736B4DX44 427 aaPredicted RBP1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 CCL16O15467 120 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 FAM74A1Q5RGS3 127 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 TEX261Q6UWH6 196 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 C3orf62Q6ZUJ4 267 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 SLC25A26Q70HW3 274 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 VSTM2AQ8TAG5 236 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 LINC00526Q96FQ7 95 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 ODF3Q96PU9 254 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 PDCD10Q9BUL8 212 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 SEC11CQ9BY50 192 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 RPRMQ9NS64 109 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 NOP16Q9Y3C1 178 aaKnown RBP1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 CITO14578 2027 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 EXPH5Q8NEV8 1989 aa1.27□□□□□ -2.21
CDC42BPA-211ENST00000466538 ZNF142P52746 1687 aaPredicted RBP1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 TTC37Q6PGP7 1564 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 ABCC10Q5T3U5 1492 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 ZNF609O15014 1411 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 F8W1H4 67 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 J3QLW9 94 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 M0R2N4 97 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 Q6AWC8 147 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 SERP1Q9Y6X1 66 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 FLG2Q5D862 2391 aaPredicted RBP1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 CACNA1BQ00975 2339 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 CC2D2AQ9P2K1 1620 aa1.26□□□□□ -2.21
CDC42BPA-211ENST00000466538 MAPKBP1O60336 1514 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 TRBV6-7A0A0A0MS04 114 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 CXorf51AA0A1B0GTR3 108 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 SNAPC5O75971 98 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 PPP3R1P63098 170 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 CATR1Q13166 79 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 C5orf17Q8NAS9 161 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 OR10AG1Q8NH19 301 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 TAS2R8Q9NYW2 309 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 ORMDL1Q9P0S3 153 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 NINQ8N4C6 2090 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 CASP8AP2Q9UKL3 1982 aa1.25□□□□□ -2.21
CDC42BPA-211ENST00000466538 UNC13CQ8NB66 2214 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 TRAV2A0A0B4J234 112 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 TRBV6-4A0A1B0GX49 114 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 OOSP1A8MZH6 123 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 MCRIP1C9JLW8 97 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 INE1O15225 51 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 KLF7O75840 302 aaPredicted RBP1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 S100A8P05109 93 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 COX7CP15954 63 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 TPPP2P59282 170 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 HSD52Q0P140 79 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 Q56UQ5 140 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 CSAG1Q6PB30 78 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 Q8N8P6 123 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 PLPP5Q8NEB5 264 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 DYNLRB2Q8TF09 96 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 LIMD2Q9BT23 127 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 SPANXDQ9BXN6 97 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 NAA60Q9H7X0 242 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 NDUFA12Q9UI09 145 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 C22orf24Q9Y442 160 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 PATJQ8NI35 1801 aa1.24□□□□□ -2.21
CDC42BPA-211ENST00000466538 TRAV30A0A087WSZ9 112 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 PIGBOS1A0A0B4J2F0 54 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 A0A0J9YY99 117 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 A6NIN4 97 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 H3BRM9 83 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 IGLV3-1P01715 115 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 PIRTP0C851 137 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 OR2T2Q6IF00 324 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 DSCR8Q96T75 97 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 RBBP6Q7Z6E9 1792 aaKnown RBP1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 RAPGEF2Q9Y4G8 1499 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 ABCA3Q99758 1704 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 CASKIN1Q8WXD9 1431 aa1.23□□□□□ -2.21
CDC42BPA-211ENST00000466538 DOCK1Q14185 1865 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 PLXNA1Q9UIW2 1896 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 MYO18AQ92614 2054 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms