RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TMEM256Q8N2U0 113 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 C16orf74Q96GX8 76 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 LINC00479Q96M42 142 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 C20orf144Q9BQM9 153 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 ZNF471Q9BX82 626 aaPredicted RBP3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 TIMM8BQ9Y5J9 83 aaPredicted RBP3.33□□□□□ -1.88
EXOSC3-204ENST00000465860 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 TRAV34A0A0B4J273 112 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 A0A0J9YY99 117 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 A0A1B0GVG6 124 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 RBAKDNA6NC62 111 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 UMAD1C9J7I0 102 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 F5H768 121 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 TEX46H3BTG2 121 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 M0R2N4 97 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 GNRH2O43555 120 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 UBE2G2P60604 165 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 AKR1C8PQ5T2L2 129 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 Q6AWC8 147 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 TMUB2Q71RG4 321 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 SLC51BQ86UW2 128 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 EIF4E3Q8N5X7 224 aaKnown RBP3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 TMEM75Q8N9X5 138 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 PYGO2Q9BRQ0 406 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 LINC00467Q9BRT7 94 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 NDUFAF3Q9BU61 184 aa3.32□□□□□ -1.88
EXOSC3-204ENST00000465860 IGLV2-18A0A075B6J9 118 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 TRGV1A0A0A0MS02 117 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 CTXND1A0A1B0GTU2 59 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 TEX48A0A1B0GUV7 120 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 A0A1B0GV50 99 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 RTL8CO15255 209 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 SPINK4O60575 86 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 CXorf1O96002 111 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 TCRAP04437 139 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 ATP5G1P05496 136 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 SFTA3P0C7M3 94 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 CSN1S1P47710 185 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 ATP5G3P48201 142 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 RAB5CP51148 216 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 TCL1AP56279 114 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 TCTAP57738 103 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 DAZ2Q13117 558 aaKnown RBP3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 OR5I1Q13606 314 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 TMEM183BQ1AE95 376 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 LGALSLQ3ZCW2 172 aaPredicted RBP3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 DPPA3Q6W0C5 159 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 TMEM183AQ8IXX5 376 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 POM121L12Q8N7R1 296 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 STOML3Q8TAV4 291 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 VSIG2Q96IQ7 327 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 ACTR3CQ9C0K3 210 aaPredicted RBP3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 MRPL16Q9NX20 251 aaKnown RBP3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 EPDR1Q9UM22 224 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
EXOSC3-204ENST00000465860 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 TRAV26-1A0A087WT03 109 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 TRBV7-9A0A0J9YWB2 115 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 A0A1W2PRE2 83 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 MAP1LC3B2A6NCE7 125 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 FAM74A7A6NL05 159 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 SNURFLB1AK76 121 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 IGHV3-53P01767 116 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 TYMSP04818 313 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 NMBP08949 121 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 SEC11BP0C7V7 166 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 CCL20P78556 96 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 Q6ZR54 194 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 PRNTQ86SH4 94 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 IQCF2Q8IXL9 164 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 C9orf62Q8N4C0 152 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 C5orf17Q8NAS9 161 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 RXFP4Q8TDU9 374 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 MAP1LC3BQ9GZQ8 125 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 TREM1Q9NP99 234 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 LINC00588Q9Y4M8 146 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 LENEPQ9Y5L5 61 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 ARL2-SNX15V9GYD0 113 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 HERC2O95714 4834 aa3.3□□□□□ -1.88
EXOSC3-204ENST00000465860 LOC100131303A0A0U1RQF7 123 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 GCGP01275 180 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 P0DMU3 169 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 FAM231AP0DMU4 169 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 FAM231CP0DMU5 169 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 RNASE3P12724 160 aaKnown RBP3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 CRIP1P50238 77 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 PPT1P50897 306 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 FLI1Q01543 452 aaPredicted RBP3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 ESRGQ1W209 222 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 TDRG1Q3Y452 100 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 FAM74A1Q5RGS3 127 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 IBA57Q5T440 356 aaKnown RBP3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 ARL6IP6Q8N6S5 226 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 CYB561D1Q8N8Q1 229 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms