RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 RAB2AP61019 212 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 ACOT6Q3I5F7 207 aaPredicted RBP6.46□□□□□ -1.38
USP39-212ENST00000465514 ZNF876PQ49A33 203 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 CFAP126Q5VTH2 177 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 PQLC2Q6ZP29 291 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 Q8N814 137 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 SGK494Q96LW2 274 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 PRADC1Q9BSG0 188 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 WFDC1Q9HC57 220 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 TRBV6-4A0A1B0GX49 114 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 SSNA1O43805 119 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 PET100P0DJ07 73 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 ZNF80P51504 273 aaPredicted RBP6.45□□□□□ -1.38
USP39-212ENST00000465514 IFITM3Q01628 133 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 RHOHQ15669 191 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 LELP1Q5T871 98 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 DPPA3Q6W0C5 159 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 C11orf21Q9P2W6 132 aa6.45□□□□□ -1.38
USP39-212ENST00000465514 TAAR5O14804 337 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 CIDEAO60543 219 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 SCXQ7RTU7 201 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 OR10G9Q8NGN4 311 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 OR10G7Q8NGN6 311 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 ATP6V0E2Q8NHE4 81 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 MARVELD1Q9BSK0 173 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 NDFIP1Q9BT67 221 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 GTSF1LQ9H1H1 148 aa6.44□□□□□ -1.38
USP39-212ENST00000465514 SERTM2A0A1B0GWG4 89 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 PGPEP1LA6NFU8 196 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 GCGP01275 180 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 ARL14EPLP0DKL9 152 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 ZNF506Q5JVG8 444 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 TMEM75Q8N9X5 138 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 PTH2Q96A98 100 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 C9orf85Q96MD7 179 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 TM2D2Q9BX73 214 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 PSG8Q9UQ74 426 aa6.43□□□□□ -1.38
USP39-212ENST00000465514 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
USP39-212ENST00000465514 K7EQM0 130 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 GAS8-AS1O95177 125 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 TCRAP04437 139 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 STAG3L2P0CL84 134 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 STAG3L3P0CL85 134 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 MGST1P10620 155 aaKnown RBP6.42□□□□□ -1.38
USP39-212ENST00000465514 RNASE3P12724 160 aaKnown RBP6.42□□□□□ -1.38
USP39-212ENST00000465514 CDC34P49427 236 aaPredicted RBP6.42□□□□□ -1.38
USP39-212ENST00000465514 WFDC2Q14508 124 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 LAGE3Q14657 143 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 C5orf17Q8NAS9 161 aa6.42□□□□□ -1.38
USP39-212ENST00000465514 LECT2O14960 151 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 IGLV2-11P01706 119 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 GCHFRP30047 84 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 HNRNPA3P51991 378 aaKnown RBP6.41□□□□□ -1.38
USP39-212ENST00000465514 SUMO1P63165 101 aaKnown RBP6.41□□□□□ -1.38
USP39-212ENST00000465514 FLI1Q01543 452 aaPredicted RBP6.41□□□□□ -1.38
USP39-212ENST00000465514 SMUG1Q53HV7 270 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 PRNTQ86SH4 94 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 SUN5Q8TC36 379 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 RAB24Q969Q5 203 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 SSBP4Q9BWG4 385 aaPredicted RBP6.41□□□□□ -1.38
USP39-212ENST00000465514 EPDR1Q9UM22 224 aa6.41□□□□□ -1.38
USP39-212ENST00000465514 TRAV8-3A0A0A6YYJ7 113 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 GAGE12JA6NER3 117 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 GAGE1Q13065 139 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 GAGE4Q13068 117 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 GAGE5Q13069 117 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 ZFP69Q49AA0 526 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 DAZ4Q86SG3 579 aaKnown RBP6.4□□□□□ -1.38
USP39-212ENST00000465514 HSD17B11Q8NBQ5 300 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 OR2G3Q8NGZ4 309 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 PARLQ9H300 379 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 DAZ3Q9NR90 486 aaKnown RBP6.4□□□□□ -1.38
USP39-212ENST00000465514 Q9UF83 564 aa6.4□□□□□ -1.38
USP39-212ENST00000465514 IGKV3D-20A0A0C4DH25 116 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 A8MWV9 139 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 GGTLC3B5MD39 225 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 LINC00694P0DN24 101 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 LGALSLQ3ZCW2 172 aaPredicted RBP6.39□□□□□ -1.39
USP39-212ENST00000465514 SAPCD1Q5SSQ6 148 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 ZFP2Q6ZN57 461 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 OR2T35Q8NGX2 323 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 BAALCQ8WXS3 180 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 SH3BGRL3Q9H299 93 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
USP39-212ENST00000465514 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.38□□□□□ -1.39
USP39-212ENST00000465514 TRAV34A0A0B4J273 112 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 CXorf1O96002 111 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 MBP02144 154 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 S100A4P26447 101 aaKnown RBP6.38□□□□□ -1.39
USP39-212ENST00000465514 ATP6V0CP27449 155 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 DEFA1P59665 94 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 DEFA3P59666 94 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 LINC01620Q4KN68 170 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 TOR2AQ5JU69 321 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 C14orf178Q8N769 122 aaPredicted RBP6.38□□□□□ -1.39
USP39-212ENST00000465514 LINC00479Q96M42 142 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 PSMG3Q9BT73 122 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms