RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 SLC50A1Q9BRV3 221 aa9.78□□□□□ -0.84
HDAC6-214ENST00000465269 LPAP08519 4548 aa9.77□□□□□ -0.84
HDAC6-214ENST00000465269 MAP1LC3B2A6NCE7 125 aa9.77□□□□□ -0.85
HDAC6-214ENST00000465269 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
HDAC6-214ENST00000465269 RNASE4P34096 147 aaKnown RBP9.77□□□□□ -0.85
HDAC6-214ENST00000465269 ANXA2RQ3ZCQ2 193 aa9.77□□□□□ -0.85
HDAC6-214ENST00000465269 DPPA3Q6W0C5 159 aa9.77□□□□□ -0.85
HDAC6-214ENST00000465269 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
HDAC6-214ENST00000465269 MAP1LC3BQ9GZQ8 125 aa9.77□□□□□ -0.85
HDAC6-214ENST00000465269 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
HDAC6-214ENST00000465269 ZNF253O75346 499 aa9.76□□□□□ -0.85
HDAC6-214ENST00000465269 IGLV2-11P01706 119 aa9.76□□□□□ -0.85
HDAC6-214ENST00000465269 RAB5CP51148 216 aa9.76□□□□□ -0.85
HDAC6-214ENST00000465269 PDE6HQ13956 83 aa9.76□□□□□ -0.85
HDAC6-214ENST00000465269 PRR9Q5T870 116 aa9.76□□□□□ -0.85
HDAC6-214ENST00000465269 C9orf47Q6ZRZ4 202 aa9.76□□□□□ -0.85
HDAC6-214ENST00000465269 PGPA6NDG6 321 aa9.75□□□□□ -0.85
HDAC6-214ENST00000465269 M0R3E3 92 aa9.75□□□□□ -0.85
HDAC6-214ENST00000465269 SLC25A5P05141 298 aaKnown RBP9.75□□□□□ -0.85
HDAC6-214ENST00000465269 PPT1P50897 306 aa9.75□□□□□ -0.85
HDAC6-214ENST00000465269 AAMDCQ9H7C9 122 aa9.75□□□□□ -0.85
HDAC6-214ENST00000465269 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
HDAC6-214ENST00000465269 UBE2G2P60604 165 aa9.74□□□□□ -0.85
HDAC6-214ENST00000465269 NHLRC2Q8NBF2 726 aa9.74□□□□□ -0.85
HDAC6-214ENST00000465269 SUN5Q8TC36 379 aa9.74□□□□□ -0.85
HDAC6-214ENST00000465269 ODF3Q96PU9 254 aa9.74□□□□□ -0.85
HDAC6-214ENST00000465269 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
HDAC6-214ENST00000465269 KRTAP9-6A0A140TA67 174 aa9.73□□□□□ -0.85
HDAC6-214ENST00000465269 CCL20P78556 96 aa9.73□□□□□ -0.85
HDAC6-214ENST00000465269 OR10J3Q5JRS4 329 aa9.73□□□□□ -0.85
HDAC6-214ENST00000465269 IBA57Q5T440 356 aaKnown RBP9.73□□□□□ -0.85
HDAC6-214ENST00000465269 TEX261Q6UWH6 196 aa9.73□□□□□ -0.85
HDAC6-214ENST00000465269 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
HDAC6-214ENST00000465269 KLLNB2CW77 178 aa9.72□□□□□ -0.85
HDAC6-214ENST00000465269 ORM1P02763 201 aa9.72□□□□□ -0.85
HDAC6-214ENST00000465269 SUMO1P63165 101 aaKnown RBP9.72□□□□□ -0.85
HDAC6-214ENST00000465269 TM2D2Q9BX73 214 aa9.72□□□□□ -0.85
HDAC6-214ENST00000465269 OTORQ9NRC9 128 aa9.72□□□□□ -0.85
HDAC6-214ENST00000465269 RPH3ALQ9UNE2 315 aa9.72□□□□□ -0.85
HDAC6-214ENST00000465269 PRELID1Q9Y255 219 aa9.72□□□□□ -0.85
HDAC6-214ENST00000465269 MUC2Q02817 5179 aa9.71□□□□□ -0.85
HDAC6-214ENST00000465269 RGS13O14921 159 aa9.71□□□□□ -0.86
HDAC6-214ENST00000465269 BLOC1S1P78537 153 aa9.71□□□□□ -0.86
HDAC6-214ENST00000465269 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.86
HDAC6-214ENST00000465269 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.86
HDAC6-214ENST00000465269 IGHV1OR15-1A0A075B7D0 117 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 IGKV2-40A0A087WW87 121 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-214ENST00000465269 TRAV1-1A0A0B4J248 108 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 C9JCJ5 164 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 TEX46H3BTG2 121 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 PAGE4O60829 102 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 IGKV2D-40P01614 121 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-214ENST00000465269 CSN1S1P47710 185 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 GNG5P63218 68 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 CST9LP1Q5W188 147 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 CMTM2Q8TAZ6 248 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 MRPL53Q96EL3 112 aaKnown RBP9.7□□□□□ -0.86
HDAC6-214ENST00000465269 FAM19A4Q96LR4 140 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
HDAC6-214ENST00000465269 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 A0A1W2PRE2 83 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 FAM74A7A6NL05 159 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 IFNA7P01567 189 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 GPX1P07203 203 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 MUC21Q5SSG8 566 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 GNG13Q9P2W3 67 aa9.69□□□□□ -0.86
HDAC6-214ENST00000465269 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
HDAC6-214ENST00000465269 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
HDAC6-214ENST00000465269 ZFAND2AQ8N6M9 145 aa9.68□□□□□ -0.86
HDAC6-214ENST00000465269 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
HDAC6-214ENST00000465269 TIRAPP58753 221 aa9.67□□□□□ -0.86
HDAC6-214ENST00000465269 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
HDAC6-214ENST00000465269 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
HDAC6-214ENST00000465269 SGK494Q96LW2 274 aa9.67□□□□□ -0.86
HDAC6-214ENST00000465269 EPDR1Q9UM22 224 aa9.67□□□□□ -0.86
HDAC6-214ENST00000465269 IFITM2Q01629 132 aa9.66□□□□□ -0.86
HDAC6-214ENST00000465269 LAGE3Q14657 143 aa9.66□□□□□ -0.86
HDAC6-214ENST00000465269 Q6ZRU5 148 aa9.66□□□□□ -0.86
HDAC6-214ENST00000465269 NKX6-2Q9C056 277 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-214ENST00000465269 TRAV8-1A0A0A6YYK1 113 aa9.65□□□□□ -0.86
HDAC6-214ENST00000465269 PANO1I0J062 215 aa9.65□□□□□ -0.86
HDAC6-214ENST00000465269 TCRAP04437 139 aa9.65□□□□□ -0.86
HDAC6-214ENST00000465269 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.86
HDAC6-214ENST00000465269 LYPD6BQ8NI32 183 aa9.65□□□□□ -0.86
HDAC6-214ENST00000465269 MANBALQ9NQG1 85 aa9.65□□□□□ -0.86
HDAC6-214ENST00000465269 TRAV34A0A0B4J273 112 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 CRISP2P16562 243 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 TDRG1Q3Y452 100 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 LELP1Q5T871 98 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 ARL6IP6Q8N6S5 226 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 Q8N976 141 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 OR4C5Q8NGB2 326 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 Q8TAT8 98 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 RASL10AQ92737 203 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 LINC00479Q96M42 142 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 ARL2-SNX15V9GYD0 113 aa9.64□□□□□ -0.87
HDAC6-214ENST00000465269 TRAV4A0A0B4J268 109 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms