RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 Q8N6K4 173 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 TCTEX1D1Q8N7M0 179 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 RERGLQ9H628 205 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 BOKQ9UMX3 212 aaPredicted RBP0.89□□□□□ -2.27
CLK1-208ENST00000464454 PHRF1Q9P1Y6 1649 aaKnown RBP0.89□□□□□ -2.27
CLK1-208ENST00000464454 VPS8Q8N3P4 1428 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 TANC2Q9HCD6 1990 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 FBN2P35556 2912 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 VIRMAQ69YN4 1812 aaKnown RBP0.88□□□□□ -2.27
CLK1-208ENST00000464454 F6UZH7 168 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 ADCYAP1P18509 176 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 RHOHQ15669 191 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 MEIG1Q5JSS6 88 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 NDUFA11Q86Y39 141 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 C12orf57Q99622 126 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 SMIM7Q9BQ49 75 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 PSMG3Q9BT73 122 aaPredicted RBP0.88□□□□□ -2.27
CLK1-208ENST00000464454 RPRMQ9NS64 109 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 TAS2R8Q9NYW2 309 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 MED12Q93074 2177 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 MUC4Q99102 2169 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 KIDINS220Q9ULH0 1771 aa0.88□□□□□ -2.27
CLK1-208ENST00000464454 FOCADQ5VW36 1801 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 CFTRP13569 1480 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 C3orf85A0A1B0GTC6 90 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 SPAARA0A1B0GVQ0 90 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 ATP6V1G2-DDX39BF2Z307 99 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 CCDC179H3BU77 68 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 HIST1H1DP16402 221 aaKnown RBP0.87□□□□□ -2.27
CLK1-208ENST00000464454 PDE6GP18545 87 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 MRPS10P82664 201 aaKnown RBP0.87□□□□□ -2.27
CLK1-208ENST00000464454 NEDD8Q15843 81 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 LINC00299Q6ZSB3 139 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 C5orf17Q8NAS9 161 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 VSTM2AQ8TAG5 236 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 PPDPFLQ8WWR9 84 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 TCEAL7Q9BRU2 100 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 SPANXDQ9BXN6 97 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 NAIPQ13075 1403 aa0.87□□□□□ -2.27
CLK1-208ENST00000464454 ZNF469Q96JG9 3925 aaPredicted RBP0.87□□□□□ -2.27
CLK1-208ENST00000464454 PHLPP1O60346 1717 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 CCNB3Q8WWL7 1395 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 A0A1W2PPM0 123 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 A0A1W2PRS3 328 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 J3QLW9 94 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 EDF1O60869 148 aaKnown RBP0.86□□□□□ -2.27
CLK1-208ENST00000464454 GNG4P50150 75 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 MIC13Q5XKP0 118 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 Q6AWC8 147 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 Q6ZS92 163 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 KCNRGQ8N5I3 272 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 DYNLRB2Q8TF09 96 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 LSM10Q969L4 123 aaKnown RBP0.86□□□□□ -2.27
CLK1-208ENST00000464454 PPP3R2Q96LZ3 170 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 NAA60Q9H7X0 242 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 NOP16Q9Y3C1 178 aaKnown RBP0.86□□□□□ -2.27
CLK1-208ENST00000464454 SERP1Q9Y6X1 66 aa0.86□□□□□ -2.27
CLK1-208ENST00000464454 EIF4G3O43432 1585 aaKnown RBP0.86□□□□□ -2.27
CLK1-208ENST00000464454 QRICH2Q9H0J4 1663 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 NUPR2A6NF83 97 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 JMJD7-PLA2G4BH0Y9G9 81 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 PPYP01298 95 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 IGLV3-1P01715 115 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 GYPBP06028 91 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 AKAIN1P0CW23 69 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 SMIM6P0DI80 62 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 Q56UQ5 140 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 OR2T2Q6IF00 324 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 LINC00575Q6W349 94 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 SNX29P2Q8IUI4 249 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 COPS9Q8WXC6 57 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 GNG8Q9UK08 70 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 AKAP11Q9UKA4 1901 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 PTPRMP28827 1452 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 SPEF2Q9C093 1822 aa0.85□□□□□ -2.27
CLK1-208ENST00000464454 BBIP1A8MTZ0 92 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 NDUFB6O95139 128 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 RBP2P50120 134 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 LYPD5Q6UWN5 251 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 C3orf62Q6ZUJ4 267 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 SBSPONQ8IVN8 264 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 PDCD10Q9BUL8 212 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 SEC11CQ9BY50 192 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 WFDC10AQ9H1F0 79 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 NDUFA12Q9UI09 145 aa0.84□□□□□ -2.27
CLK1-208ENST00000464454 ZFC3H1O60293 1989 aaKnown RBP0.84□□□□□ -2.28
CLK1-208ENST00000464454 MYOM2P54296 1465 aa0.84□□□□□ -2.28
CLK1-208ENST00000464454 MAPKBP1O60336 1514 aa0.84□□□□□ -2.28
CLK1-208ENST00000464454 ATG2AQ2TAZ0 1938 aa0.83□□□□□ -2.28
CLK1-208ENST00000464454 KIAA1549LQ6ZVL6 1849 aa0.83□□□□□ -2.28
CLK1-208ENST00000464454 LOC107984156A0A0G2JMH3 177 aa0.83□□□□□ -2.28
CLK1-208ENST00000464454 MCRIP1C9JLW8 97 aa0.83□□□□□ -2.28
CLK1-208ENST00000464454 M0R129 80 aa0.83□□□□□ -2.28
CLK1-208ENST00000464454 PIRTP0C851 137 aa0.83□□□□□ -2.28
CLK1-208ENST00000464454 SLC25A6P12236 298 aa0.83□□□□□ -2.28
CLK1-208ENST00000464454 C9orf116Q5BN46 136 aaPredicted RBP0.83□□□□□ -2.28
CLK1-208ENST00000464454 SPANXN1Q5VSR9 72 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms