RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 C20orf202A1L168 122 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 PET117Q6UWS5 81 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 FAM19A4Q96LR4 140 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 F6UB75 175 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 J3KRW8 73 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 SNAI2O43623 268 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 GAS8-AS1O95177 125 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 IGLL1P15814 213 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 OR8A1Q8NGG7 326 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 ZNF747Q9BV97 191 aa10.86□□□□□ -0.67
COL5A1-205ENST00000464187 PPBPP02775 128 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 MCRIP2Q9BUT9 160 aaKnown RBP10.84□□□□□ -0.67
COL5A1-205ENST00000464187 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 TRAV21A0A0B4J279 112 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 H0Y8G0 127 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 H3BVH4 76 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 Q6ZN92 141 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 APRG1Q8IVJ8 170 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 DCANP1Q8TF63 244 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
COL5A1-205ENST00000464187 WNK1Q9H4A3 2382 aa10.83□□□□□ -0.68
COL5A1-205ENST00000464187 EVI2AP22794 236 aa10.83□□□□□ -0.68
COL5A1-205ENST00000464187 HNRNPA3P51991 378 aaKnown RBP10.83□□□□□ -0.68
COL5A1-205ENST00000464187 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
COL5A1-205ENST00000464187 CACNG7P62955 275 aa10.83□□□□□ -0.68
COL5A1-205ENST00000464187 KRTAP24-1Q3LI83 254 aa10.83□□□□□ -0.68
COL5A1-205ENST00000464187 WFDC3Q8IUB2 231 aa10.83□□□□□ -0.68
COL5A1-205ENST00000464187 MAP1LC3AQ9H492 121 aa10.83□□□□□ -0.68
COL5A1-205ENST00000464187 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
COL5A1-205ENST00000464187 ATRQ13535 2644 aa10.82□□□□□ -0.68
COL5A1-205ENST00000464187 hDV102S1A0JD36 115 aa10.82□□□□□ -0.68
COL5A1-205ENST00000464187 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
COL5A1-205ENST00000464187 GATA1P15976 413 aaPredicted RBP10.82□□□□□ -0.68
COL5A1-205ENST00000464187 FXYD7P58549 80 aa10.82□□□□□ -0.68
COL5A1-205ENST00000464187 KIR3DS1Q14943 382 aa10.82□□□□□ -0.68
COL5A1-205ENST00000464187 PRIMA1Q86XR5 153 aa10.82□□□□□ -0.68
COL5A1-205ENST00000464187 CITED1Q99966 193 aa10.82□□□□□ -0.68
COL5A1-205ENST00000464187 TRBV7-9A0A0J9YWB2 115 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 HBDP02042 147 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
COL5A1-205ENST00000464187 TFPI2P48307 235 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 DYNLRB2Q8TF09 96 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 TSPOP30536 169 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 ID1P41134 155 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 SPANXN1Q5VSR9 72 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 SAMD13Q5VXD3 122 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 SMIM15Q7Z3B0 74 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 PMCHL2Q9BQD1 86 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 ST20Q9HBF5 79 aa10.81□□□□□ -0.68
COL5A1-205ENST00000464187 ZMAT5Q9UDW3 170 aaKnown RBP10.81□□□□□ -0.68
COL5A1-205ENST00000464187 PF4P02776 101 aa10.8□□□□□ -0.68
COL5A1-205ENST00000464187 ANXA2RQ3ZCQ2 193 aa10.8□□□□□ -0.68
COL5A1-205ENST00000464187 TMEM61Q8N0U2 210 aa10.8□□□□□ -0.68
COL5A1-205ENST00000464187 LINC00469Q8N7U9 141 aa10.8□□□□□ -0.68
COL5A1-205ENST00000464187 TENM1Q9UKZ4 2725 aa10.8□□□□□ -0.68
COL5A1-205ENST00000464187 BATFQ16520 125 aa10.79□□□□□ -0.68
COL5A1-205ENST00000464187 DEFB114Q30KQ6 69 aa10.79□□□□□ -0.68
COL5A1-205ENST00000464187 K7EQG2 157 aa10.79□□□□□ -0.68
COL5A1-205ENST00000464187 ASIPP42127 132 aa10.79□□□□□ -0.68
COL5A1-205ENST00000464187 CD300EQ496F6 205 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-205ENST00000464187 NRACQ8N912 160 aa10.79□□□□□ -0.68
COL5A1-205ENST00000464187 OR2K2Q8NGT1 345 aa10.79□□□□□ -0.68
COL5A1-205ENST00000464187 NXT2Q9NPJ8 142 aaKnown RBP10.79□□□□□ -0.68
COL5A1-205ENST00000464187 FBN1P35555 2871 aaKnown RBP10.79□□□□□ -0.68
COL5A1-205ENST00000464187 IGLV2-18A0A075B6J9 118 aa10.78□□□□□ -0.68
COL5A1-205ENST00000464187 TRAV26-2A0A0B4J265 109 aa10.78□□□□□ -0.68
COL5A1-205ENST00000464187 KLLNB2CW77 178 aa10.78□□□□□ -0.68
COL5A1-205ENST00000464187 SPRY2O43597 315 aa10.78□□□□□ -0.68
COL5A1-205ENST00000464187 MED14OSP0DP75 135 aa10.78□□□□□ -0.68
COL5A1-205ENST00000464187 SNRPD3P62318 126 aaKnown RBP10.78□□□□□ -0.68
COL5A1-205ENST00000464187 TP73-AS1Q9UF72 201 aa10.78□□□□□ -0.68
COL5A1-205ENST00000464187 MUC4Q99102 2169 aa10.78□□□□□ -0.68
COL5A1-205ENST00000464187 HSBP1L1C9JCN9 74 aa10.77□□□□□ -0.68
COL5A1-205ENST00000464187 SAP30O75446 220 aa10.77□□□□□ -0.68
COL5A1-205ENST00000464187 ZNF688P0C7X2 276 aa10.77□□□□□ -0.68
COL5A1-205ENST00000464187 SCRT2Q9NQ03 307 aa10.77□□□□□ -0.68
COL5A1-205ENST00000464187 MRPS16Q9Y3D3 137 aaKnown RBP10.77□□□□□ -0.68
COL5A1-205ENST00000464187 M0R381 172 aa10.77□□□□□ -0.69
COL5A1-205ENST00000464187 S100A4P26447 101 aaKnown RBP10.77□□□□□ -0.69
COL5A1-205ENST00000464187 LGALS9BQ3B8N2 356 aa10.77□□□□□ -0.69
COL5A1-205ENST00000464187 PSMG4Q5JS54 123 aa10.77□□□□□ -0.69
COL5A1-205ENST00000464187 LGALS9CQ6DKI2 356 aa10.77□□□□□ -0.69
COL5A1-205ENST00000464187 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.69
COL5A1-205ENST00000464187 Q8N8P6 123 aa10.77□□□□□ -0.69
COL5A1-205ENST00000464187 AGRNO00468 2067 aa10.76□□□□□ -0.69
COL5A1-205ENST00000464187 GNRH2O43555 120 aa10.76□□□□□ -0.69
COL5A1-205ENST00000464187 RNASE3P12724 160 aaKnown RBP10.76□□□□□ -0.69
COL5A1-205ENST00000464187 LEPP41159 167 aa10.76□□□□□ -0.69
COL5A1-205ENST00000464187 IFI27L1Q96BM0 104 aa10.76□□□□□ -0.69
COL5A1-205ENST00000464187 PRSS47A8MTI9 375 aa10.75□□□□□ -0.69
COL5A1-205ENST00000464187 FCER1GP30273 86 aa10.75□□□□□ -0.69
COL5A1-205ENST00000464187 DEFB125Q8N687 156 aa10.75□□□□□ -0.69
COL5A1-205ENST00000464187 MRAP2Q96G30 205 aa10.75□□□□□ -0.69
COL5A1-205ENST00000464187 GOLT1BQ9Y3E0 138 aa10.75□□□□□ -0.69
COL5A1-205ENST00000464187 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
COL5A1-205ENST00000464187 TRAV2A0A0B4J234 112 aa10.74□□□□□ -0.69
COL5A1-205ENST00000464187 TRAV25A0A0B4J276 109 aa10.74□□□□□ -0.69
COL5A1-205ENST00000464187 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms