RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 A0A0J9YY99 117 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 FAM240AA0A1B0GVK7 77 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM30CPA0ZSE6 113 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 C15orf61A6NNL5 157 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 LY6LH3BQJ8 138 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 OVOL3O00110 214 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IGHV3-30P01768 117 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IGKV3-11P04433 115 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 PRSS2P07478 247 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IGHV3-30-5P0DP03 117 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 LOXP28300 417 aaPredicted RBP2.76□□□□□ -1.97
COL8A1-205ENST00000463753 NXPH1P58417 271 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 EIF4EBP1Q13541 118 aaPredicted RBP2.76□□□□□ -1.97
COL8A1-205ENST00000463753 VMA21Q3ZAQ7 101 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 FAM27BQ5VT28 67 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 CXorf67Q86X51 503 aaPredicted RBP2.76□□□□□ -1.97
COL8A1-205ENST00000463753 C14orf178Q8N769 122 aaPredicted RBP2.76□□□□□ -1.97
COL8A1-205ENST00000463753 WDR31Q8NA23 367 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 LEAP2Q969E1 77 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 ZNF714Q96N38 554 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 SCGB3A1Q96QR1 104 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 DCTN5Q9BTE1 182 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM243Q9BU79 118 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 Q9UFV3 132 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 FREM2Q5SZK8 3169 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 PCNX2A6NKB5 2137 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 WDFY4Q6ZS81 3184 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 LRP4O75096 1905 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 IGHV3-64A0A075B6Q5 118 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 TRBV7-1A0A0A6YYK4 115 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 TRGV8A0A0C4DH27 118 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 LYZL6O75951 148 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 GRPP07492 148 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 RNASE2P10153 161 aaKnown RBP2.75□□□□□ -1.97
COL8A1-205ENST00000463753 RPL18AQ02543 176 aaKnown RBP2.75□□□□□ -1.97
COL8A1-205ENST00000463753 FHL2Q14192 279 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 LAGE3Q14657 143 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 LPAL2Q16609 132 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 C6orf226Q5I0X4 101 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 S100A7L2Q5SY68 101 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 C10orf128Q5T292 105 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 Q6ZS52 159 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 SERP2Q8N6R1 65 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 C20orf173Q96LM9 149 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 Q96MF0 132 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 OTORQ9NRC9 128 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 ITPR1Q14643 2758 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 SVILO95425 2214 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 UPK2O00526 184 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 CXCL13O43927 109 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 CRIP1P50238 77 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 CCL8P80075 99 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 NUP37Q8NFH4 326 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 KNL1Q8NG31 2342 aa2.75□□□□□ -1.97
COL8A1-205ENST00000463753 APELAP0DMC3 54 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 P0DMU3 169 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 FAM231AP0DMU4 169 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 FAM231CP0DMU5 169 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 CD40P25942 277 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 CD69Q07108 199 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 NRACQ8N912 160 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 LINC01356Q8N9X3 169 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM263Q8WUH6 116 aaKnown RBP2.74□□□□□ -1.97
COL8A1-205ENST00000463753 PRR25Q96S07 402 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 FOXB1Q99853 325 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 TET2Q6N021 2002 aaPredicted RBP2.74□□□□□ -1.97
COL8A1-205ENST00000463753 C17orf100A8MU93 164 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 H3BT86 120 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 PROP1O75360 226 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 WISP2O76076 250 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 COX6CP09669 75 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 UBE2E1P51965 193 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 GFERP55789 205 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 RBM3P98179 157 aaKnown RBP2.74□□□□□ -1.97
COL8A1-205ENST00000463753 GUSBP11Q6P575 273 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 Q6ZSV7 163 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 C9orf139Q6ZV77 190 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 FAM19A1Q7Z5A9 133 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
COL8A1-205ENST00000463753 FAM90A1Q86YD7 464 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 MUSTN1Q8IVN3 82 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM75Q8N9X5 138 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 MPLKIPQ8TAP9 179 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 DAZ1Q9NQZ3 744 aaKnown RBP2.74□□□□□ -1.97
COL8A1-205ENST00000463753 DEC1Q9P2X7 70 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 LINC00474Q9P2X8 69 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 RP1P56715 2156 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 BIRC6Q9NR09 4857 aa2.74□□□□□ -1.97
COL8A1-205ENST00000463753 PATE3B3GLJ2 98 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 NDUFC2O95298 119 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 IGLV2-11P01706 119 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 ACYP1P07311 99 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 LGALS3P17931 250 aaKnown RBP2.73□□□□□ -1.97
COL8A1-205ENST00000463753 DLX1P56177 255 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 TSPEAR-AS2P59090 65 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 LYZP61626 148 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
COL8A1-205ENST00000463753 RPS21P63220 83 aaKnown RBP2.73□□□□□ -1.97
COL8A1-205ENST00000463753 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 C20orf197Q8N268 126 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms