RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 TRAV4A0A0B4J268 109 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 A0A1W2PPQ1 181 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 GRIFINA4D1Z8 144 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 PGPEP1LA6NFU8 196 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 A8MWL6 223 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 GATCO43716 136 aaKnown RBP4.53□□□□□ -1.68
SF3B1-206ENST00000462613 ARMS2P0C7Q2 107 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 SMIM17P0DL12 118 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 SPANXN1Q5VSR9 72 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 UQCC3Q6UW78 93 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 LINC00612Q8N6U2 182 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 OCC1Q8TAD7 63 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 C9orf85Q96MD7 179 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 RPP21Q9H633 154 aaKnown RBP4.53□□□□□ -1.68
SF3B1-206ENST00000462613 C11orf21Q9P2W6 132 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 F2Z2F3 143 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 M0R381 172 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 RHODO00212 210 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 IGLV2-8P01709 118 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 OR5AL1P0C617 328 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
SF3B1-206ENST00000462613 CACNG7P62955 275 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 PNRC1Q12796 327 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-206ENST00000462613 ADIRFQ15847 76 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 FAM231DQ6ZW35 169 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 SMIM15Q7Z3B0 74 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 LINC01551Q86U37 167 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 UBE2DNLQ8IWF7 75 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 FER1L6-AS1Q8NA97 138 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 PTH2Q96A98 100 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 TPPP3Q9BW30 176 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 PRO0255Q9UI72 69 aa4.52□□□□□ -1.69
SF3B1-206ENST00000462613 DNAH9Q9NYC9 4486 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 TRAV26-1A0A087WT03 109 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 C19orf71A6NCJ1 209 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 H3BNG1 76 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 PAX4O43316 350 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 NUDT3O95989 172 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 IGHV3-53P01767 116 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 SFTA3P0C7M3 94 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 TRGC1P0CF51 173 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 P0DMU3 169 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 FAM231AP0DMU4 169 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 FAM231CP0DMU5 169 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 RPL19P84098 196 aaKnown RBP4.51□□□□□ -1.69
SF3B1-206ENST00000462613 IFITM2Q01629 132 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 CT83Q5H943 113 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 FAM74A4Q5TZK3 123 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 TMEM88Q6PEY1 159 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 NUDT10Q8NFP7 164 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 NUDT11Q96G61 164 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 AP1S3Q96PC3 154 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 PRADC1Q9BSG0 188 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 RNASE7Q9H1E1 156 aaKnown RBP4.51□□□□□ -1.69
SF3B1-206ENST00000462613 OSTCQ9NRP0 149 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 HHLA3Q9XRX5 114 aa4.51□□□□□ -1.69
SF3B1-206ENST00000462613 FAM231BA6NCW3 169 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 K7EN84 100 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 PPP1R2P9O14990 202 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 SNAI2O43623 268 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 CCL18P55774 89 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 RPL23P62829 140 aaKnown RBP4.5□□□□□ -1.69
SF3B1-206ENST00000462613 RHOHQ15669 191 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 MRPL23Q16540 153 aaKnown RBP4.5□□□□□ -1.69
SF3B1-206ENST00000462613 ZFP2Q6ZN57 461 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 SH2D6Q7Z4S9 175 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 COMMD7Q86VX2 200 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-206ENST00000462613 OR10G8Q8NGN5 311 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 SFRP2Q96HF1 295 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 ICOSQ9Y6W8 199 aa4.5□□□□□ -1.69
SF3B1-206ENST00000462613 A0A0J9YY99 117 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 F5H697 171 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 F8W036 122 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 H7C1H1 209 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 RS1O15537 224 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 LY6G6CO95867 125 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 MT-ND4LP03901 98 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 GZMBP10144 247 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 SRIP30626 198 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 CRYBA4P53673 196 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 SSTP61278 116 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 SRSF3P84103 164 aaKnown RBP4.49□□□□□ -1.69
SF3B1-206ENST00000462613 ZNF56Q15929 161 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 NDUFA5Q16718 116 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 CFAP126Q5VTH2 177 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 DMRTA1Q5VZB9 504 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 LGALS9CQ6DKI2 356 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 WDR73Q6P4I2 378 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 TSKUQ8WUA8 353 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 ISOC2Q96AB3 205 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 ZNF479Q96JC4 524 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 SSBP4Q9BWG4 385 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-206ENST00000462613 GFRA4Q9GZZ7 299 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 SCRT2Q9NQ03 307 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
SF3B1-206ENST00000462613 HUWE1Q7Z6Z7 4374 aaKnown RBP4.49□□□□□ -1.69
SF3B1-206ENST00000462613 IGHV3-73A0A0B4J1V6 119 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 TRBV6-4A0A1B0GX49 114 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 LINC00862A6NCI5 91 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms