RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 HSD17B11Q8NBQ5 300 aa10.29□□□□□ -0.76
SKA3-204ENST00000462482 RAB24Q969Q5 203 aa10.29□□□□□ -0.76
SKA3-204ENST00000462482 C9orf85Q96MD7 179 aa10.29□□□□□ -0.76
SKA3-204ENST00000462482 DMBT1Q9UGM3 2413 aaPredicted RBP10.29□□□□□ -0.76
SKA3-204ENST00000462482 TRAV8-3A0A0A6YYJ7 113 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 A8MWV9 139 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 CXorf1O96002 111 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 ZNF80P51504 273 aaPredicted RBP10.28□□□□□ -0.76
SKA3-204ENST00000462482 DPPA3Q6W0C5 159 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 OR2G3Q8NGZ4 309 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 PSMG3Q9BT73 122 aaPredicted RBP10.28□□□□□ -0.76
SKA3-204ENST00000462482 C11orf21Q9P2W6 132 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 EPDR1Q9UM22 224 aa10.28□□□□□ -0.76
SKA3-204ENST00000462482 J3QL48 77 aa10.27□□□□□ -0.77
SKA3-204ENST00000462482 C1QBP02746 253 aa10.27□□□□□ -0.77
SKA3-204ENST00000462482 SERF2P84101 59 aa10.27□□□□□ -0.77
SKA3-204ENST00000462482 LGALSLQ3ZCW2 172 aaPredicted RBP10.27□□□□□ -0.77
SKA3-204ENST00000462482 ZFP2Q6ZN57 461 aa10.27□□□□□ -0.77
SKA3-204ENST00000462482 TMEM75Q8N9X5 138 aa10.27□□□□□ -0.77
SKA3-204ENST00000462482 ACTR3CQ9C0K3 210 aaPredicted RBP10.27□□□□□ -0.77
SKA3-204ENST00000462482 A0A087WWC5 75 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 GGTLC3B5MD39 225 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 SEC11BP0C7V7 166 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 ASIPP42127 132 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 GAGE1Q13065 139 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 GAGE4Q13068 117 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 GAGE5Q13069 117 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 GAGE13Q4V321 117 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 COX11Q9Y6N1 276 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 URGCP-MRPS24S4R325 110 aa10.26□□□□□ -0.77
SKA3-204ENST00000462482 IFNA7P01567 189 aa10.25□□□□□ -0.77
SKA3-204ENST00000462482 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
SKA3-204ENST00000462482 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
SKA3-204ENST00000462482 ATP6V0CP27449 155 aa10.25□□□□□ -0.77
SKA3-204ENST00000462482 FGF8P55075 233 aaPredicted RBP10.25□□□□□ -0.77
SKA3-204ENST00000462482 PIK3CD-AS1Q5SR53 167 aa10.25□□□□□ -0.77
SKA3-204ENST00000462482 SUN5Q8TC36 379 aa10.25□□□□□ -0.77
SKA3-204ENST00000462482 RMI2Q96E14 147 aa10.25□□□□□ -0.77
SKA3-204ENST00000462482 PARLQ9H300 379 aa10.25□□□□□ -0.77
SKA3-204ENST00000462482 HERC1Q15751 4861 aa10.25□□□□□ -0.77
SKA3-204ENST00000462482 FABP5P3A8MUU1 101 aa10.24□□□□□ -0.77
SKA3-204ENST00000462482 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
SKA3-204ENST00000462482 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
SKA3-204ENST00000462482 OR2T35Q8NGX2 323 aa10.24□□□□□ -0.77
SKA3-204ENST00000462482 TNFSF18Q9UNG2 199 aa10.24□□□□□ -0.77
SKA3-204ENST00000462482 FAT1Q14517 4588 aa10.24□□□□□ -0.77
SKA3-204ENST00000462482 A0A1W2PRE2 83 aa10.23□□□□□ -0.77
SKA3-204ENST00000462482 KCNIP4Q6PIL6 250 aa10.23□□□□□ -0.77
SKA3-204ENST00000462482 AQP10Q96PS8 301 aa10.23□□□□□ -0.77
SKA3-204ENST00000462482 RHODO00212 210 aa10.22□□□□□ -0.77
SKA3-204ENST00000462482 INO80EQ8NBZ0 244 aaPredicted RBP10.22□□□□□ -0.77
SKA3-204ENST00000462482 MED28Q9H204 178 aa10.22□□□□□ -0.77
SKA3-204ENST00000462482 FAM30AQ9NZY2 134 aa10.22□□□□□ -0.77
SKA3-204ENST00000462482 ALG5Q9Y673 324 aa10.22□□□□□ -0.77
SKA3-204ENST00000462482 ARL2-SNX15V9GYD0 113 aa10.22□□□□□ -0.77
SKA3-204ENST00000462482 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.77
SKA3-204ENST00000462482 BORCS7-ASMTA0A0B4J1R7 106 aa10.21□□□□□ -0.77
SKA3-204ENST00000462482 TRAV34A0A0B4J273 112 aa10.21□□□□□ -0.77
SKA3-204ENST00000462482 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
SKA3-204ENST00000462482 B4DEV8 164 aa10.21□□□□□ -0.77
SKA3-204ENST00000462482 LECT2O14960 151 aa10.21□□□□□ -0.77
SKA3-204ENST00000462482 DAZ4Q86SG3 579 aaKnown RBP10.21□□□□□ -0.77
SKA3-204ENST00000462482 NKX6-2Q9C056 277 aaPredicted RBP10.21□□□□□ -0.77
SKA3-204ENST00000462482 DAZ3Q9NR90 486 aaKnown RBP10.21□□□□□ -0.77
SKA3-204ENST00000462482 IL36BQ9NZH7 164 aa10.21□□□□□ -0.77
SKA3-204ENST00000462482 RBFOX3A6NFN3 312 aa10.2□□□□□ -0.78
SKA3-204ENST00000462482 ELOBQ15370 118 aa10.2□□□□□ -0.78
SKA3-204ENST00000462482 Q8N976 141 aa10.2□□□□□ -0.78
SKA3-204ENST00000462482 OR11H4Q8NGC9 324 aa10.2□□□□□ -0.78
SKA3-204ENST00000462482 LINC00479Q96M42 142 aa10.2□□□□□ -0.78
SKA3-204ENST00000462482 A0A087WX48 190 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 A6NHS1 94 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 H3BVH4 76 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 PEX7O00628 323 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 UBE2G2P60604 165 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 WFDC2Q14508 124 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 FAM74A4Q5TZK3 123 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 Q8N3U1 123 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 HIST1H2BAQ96A08 127 aa10.19□□□□□ -0.78
SKA3-204ENST00000462482 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 CTXND1A0A1B0GTU2 59 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 LINC00694P0DN24 101 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 Q86TA4 180 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 C14orf178Q8N769 122 aaPredicted RBP10.18□□□□□ -0.78
SKA3-204ENST00000462482 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 BAALCQ8WXS3 180 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 SAMD10Q9BYL1 202 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 JPT2Q9H910 190 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 PHLDA3Q9Y5J5 127 aa10.18□□□□□ -0.78
SKA3-204ENST00000462482 SRRM2Q9UQ35 2752 aaKnown RBP10.18□□□□□ -0.78
SKA3-204ENST00000462482 M0R036 132 aa10.17□□□□□ -0.78
SKA3-204ENST00000462482 ARMS2P0C7Q2 107 aa10.17□□□□□ -0.78
SKA3-204ENST00000462482 TPT1P13693 172 aaKnown RBP10.17□□□□□ -0.78
SKA3-204ENST00000462482 UBE2G1P62253 170 aa10.17□□□□□ -0.78
SKA3-204ENST00000462482 AKR1C8PQ5T2L2 129 aa10.17□□□□□ -0.78
SKA3-204ENST00000462482 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
SKA3-204ENST00000462482 ZFP30Q9Y2G7 519 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 507.6 ms