RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 FAM90A10PA6NDY2 464 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 FAM90A20PA6NIJ5 464 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 LGALS9O00182 355 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 COX7CP15954 63 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 ERVK-16P61578 105 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 C11orf53Q8IXP5 236 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 SRSF12Q8WXF0 261 aaKnown RBP4.53□□□□□ -1.68
CLK1-207ENST00000461981 RITA1Q96K30 269 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 SLC25A39Q9BZJ4 359 aaPredicted RBP4.53□□□□□ -1.68
CLK1-207ENST00000461981 PRSS22Q9GZN4 317 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 HIVEP2P31629 2446 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 ANK2Q01484 3957 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 TRBV7-7A0A0K0K1E9 115 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 CLPSL1A2RUU4 121 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 RIGQ13278 110 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 NDUFA11Q86Y39 141 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 ZMAT4Q9H898 229 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 TRAV3A0A0B4J244 114 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 J3QQQ9 107 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 UBE2D1P51668 147 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 FGF12P61328 243 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 FAM27BQ5VT28 67 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 ORMDL3Q8N138 153 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 MYOZ3Q8TDC0 251 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 SLC25A2Q9BXI2 301 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 ZNF492Q9P255 531 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 PRR14LQ5THK1 2151 aa4.52□□□□□ -1.69
CLK1-207ENST00000461981 IGHV3-15A0A0B4J1V0 119 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 LINC00473A8K010 186 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 LGALS1P09382 135 aaKnown RBP4.51□□□□□ -1.69
CLK1-207ENST00000461981 Q6YL49 198 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 PLEKHB2Q96CS7 222 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 MRPL20Q9BYC9 149 aaKnown RBP4.51□□□□□ -1.69
CLK1-207ENST00000461981 GFRA4Q9GZZ7 299 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 KAAG1Q9UBP8 84 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 ASPMQ8IZT6 3477 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 IGKV1OR2-108A0A075B7D4 117 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 PGPA6NDG6 321 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 CRYGAP11844 174 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 EBI3Q14213 229 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 CT83Q5H943 113 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 ZNF837Q96EG3 531 aaPredicted RBP4.51□□□□□ -1.69
CLK1-207ENST00000461981 PAXXQ9BUH6 204 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 A0A0U1RRA0 63 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 SRRM4A7MD48 611 aaKnown RBP4.51□□□□□ -1.69
CLK1-207ENST00000461981 ZNF815PA8K554 130 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 ELANEP08246 267 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 CKS2P33552 79 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 TMEM258P61165 79 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 MLANAQ16655 118 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 SLC25A48Q6ZT89 311 aaKnown RBP4.51□□□□□ -1.69
CLK1-207ENST00000461981 DEFB108BQ8NET1 73 aa4.51□□□□□ -1.69
CLK1-207ENST00000461981 FOXA2Q9Y261 457 aaPredicted RBP4.51□□□□□ -1.69
CLK1-207ENST00000461981 DNAJC9-AS1A6NH13 148 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 FCGR3BO75015 233 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 PRDX2P32119 198 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 Q1RN00 199 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 PSMG4Q5JS54 123 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 C8orf31Q8N9H6 132 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 FAM167A-AS1Q96KT0 104 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 WDFY3Q8IZQ1 3526 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 IGHV3-43A0A0B4J1X8 118 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 FAM90A7PA6NKC0 464 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 FAM90A22PA8MWA6 464 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 FAM90A12PA8MX19 464 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 IGHV3-43DP0DP04 118 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 MRPL51Q4U2R6 128 aaKnown RBP4.5□□□□□ -1.69
CLK1-207ENST00000461981 C2orf82Q6UX34 121 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 PRNTQ86SH4 94 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 EEF1AKMT3Q96AZ1 226 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 MLST8Q9BVC4 326 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 RETNQ9HD89 108 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 ARFGEF3Q5TH69 2177 aa4.5□□□□□ -1.69
CLK1-207ENST00000461981 NAV3Q8IVL0 2385 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 IGHV3-64DA0A0J9YX35 117 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 IQCF6A8MYZ5 107 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 IGHV1-46P01743 117 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 CFC1BP0CG36 223 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 CFC1P0CG37 223 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 LINC01620Q4KN68 170 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 TMEM170BQ5T4T1 132 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 C9orf85Q96MD7 179 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 ABCA4P78363 2273 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 LAMA5O15230 3695 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 Q6ZSR3 168 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 LINC00311Q8N616 119 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 MAPK1IP1LQ8NDC0 245 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 FGF23Q9GZV9 251 aaPredicted RBP4.49□□□□□ -1.69
CLK1-207ENST00000461981 LOC400499M0QZD8 3231 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 COX7A2P2O60397 106 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 RPL13AP40429 203 aaKnown RBP4.49□□□□□ -1.69
CLK1-207ENST00000461981 GOLT1AQ6ZVE7 132 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 Q8N2B8 174 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 KLHL30-AS1Q8NEE0 82 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 CTSZQ9UBR2 303 aa4.49□□□□□ -1.69
CLK1-207ENST00000461981 FLNAP21333 2647 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms