RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RNASE3P12724 160 aaKnown RBP10.62□□□□□ -0.71
VARS-219ENST00000461328 SULT1A2P50226 295 aa10.62□□□□□ -0.71
VARS-219ENST00000461328 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
VARS-219ENST00000461328 ZNF506Q5JVG8 444 aa10.62□□□□□ -0.71
VARS-219ENST00000461328 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
VARS-219ENST00000461328 FAT2Q9NYQ8 4349 aa10.62□□□□□ -0.71
VARS-219ENST00000461328 TMSB15BA0A087X1C1 80 aa10.61□□□□□ -0.71
VARS-219ENST00000461328 H3BVH4 76 aa10.61□□□□□ -0.71
VARS-219ENST00000461328 K7EQD1 137 aa10.61□□□□□ -0.71
VARS-219ENST00000461328 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
VARS-219ENST00000461328 TXNDC17Q9BRA2 123 aa10.61□□□□□ -0.71
VARS-219ENST00000461328 IGHV3-73A0A0B4J1V6 119 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 GRIFINA4D1Z8 144 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 PGPEP1LA6NFU8 196 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 IFNA1P01562 189 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
VARS-219ENST00000461328 CRIP1P50238 77 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 CCL20P78556 96 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 BAGE2Q86Y30 109 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 C9orf62Q8N4C0 152 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
VARS-219ENST00000461328 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
VARS-219ENST00000461328 KRBOX1C9JBD0 128 aa10.59□□□□□ -0.71
VARS-219ENST00000461328 RS1O15537 224 aa10.59□□□□□ -0.71
VARS-219ENST00000461328 NXPH4O95158 308 aa10.59□□□□□ -0.71
VARS-219ENST00000461328 ZNF674Q2M3X9 581 aa10.59□□□□□ -0.71
VARS-219ENST00000461328 SYT8Q8NBV8 401 aa10.59□□□□□ -0.71
VARS-219ENST00000461328 PRADC1Q9BSG0 188 aa10.59□□□□□ -0.71
VARS-219ENST00000461328 LOC100131303A0A0U1RQF7 123 aa10.58□□□□□ -0.72
VARS-219ENST00000461328 CIDEAO60543 219 aa10.58□□□□□ -0.72
VARS-219ENST00000461328 TNP2Q05952 138 aa10.58□□□□□ -0.72
VARS-219ENST00000461328 LINC01559Q495D7 138 aa10.58□□□□□ -0.72
VARS-219ENST00000461328 PRR27Q6MZM9 219 aa10.58□□□□□ -0.72
VARS-219ENST00000461328 PTH2Q96A98 100 aa10.58□□□□□ -0.72
VARS-219ENST00000461328 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
VARS-219ENST00000461328 A8MWV9 139 aa10.57□□□□□ -0.72
VARS-219ENST00000461328 SIVA1O15304 175 aa10.57□□□□□ -0.72
VARS-219ENST00000461328 ARMS2P0C7Q2 107 aa10.57□□□□□ -0.72
VARS-219ENST00000461328 RPL35P42766 123 aaKnown RBP10.57□□□□□ -0.72
VARS-219ENST00000461328 RHOHQ15669 191 aa10.57□□□□□ -0.72
VARS-219ENST00000461328 LYPD5Q6UWN5 251 aa10.57□□□□□ -0.72
VARS-219ENST00000461328 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
VARS-219ENST00000461328 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
VARS-219ENST00000461328 A0A1W2PPQ1 181 aa10.56□□□□□ -0.72
VARS-219ENST00000461328 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
VARS-219ENST00000461328 SLC25A29Q8N8R3 303 aa10.56□□□□□ -0.72
VARS-219ENST00000461328 C11orf52Q96A22 123 aa10.56□□□□□ -0.72
VARS-219ENST00000461328 PARLQ9H300 379 aa10.56□□□□□ -0.72
VARS-219ENST00000461328 M0R381 172 aa10.55□□□□□ -0.72
VARS-219ENST00000461328 MGST1P10620 155 aaKnown RBP10.55□□□□□ -0.72
VARS-219ENST00000461328 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
VARS-219ENST00000461328 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
VARS-219ENST00000461328 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
VARS-219ENST00000461328 PKHD1P08F94 4074 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 TRBV6-4A0A1B0GX49 114 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 PDE6DO43924 150 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 BCL2P10415 239 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 RPL19P84098 196 aaKnown RBP10.54□□□□□ -0.72
VARS-219ENST00000461328 CENPWQ5EE01 88 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 FAM74A4Q5TZK3 123 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 ALKAL2Q6UX46 152 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 ZFP82Q8N141 532 aa10.54□□□□□ -0.72
VARS-219ENST00000461328 PKD1P98161 4303 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 A0A1B0GVG6 124 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 RHODO00212 210 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 NKX2-5P52952 324 aaPredicted RBP10.53□□□□□ -0.72
VARS-219ENST00000461328 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 ZNF575Q86XF7 245 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 MLST8Q9BVC4 326 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 JPT2Q9H910 190 aa10.53□□□□□ -0.72
VARS-219ENST00000461328 BTF3P20290 206 aaKnown RBP10.52□□□□□ -0.73
VARS-219ENST00000461328 TAGLN2P37802 199 aaKnown RBP10.52□□□□□ -0.73
VARS-219ENST00000461328 GNG4P50150 75 aa10.52□□□□□ -0.73
VARS-219ENST00000461328 WFDC10BQ8IUB3 73 aa10.52□□□□□ -0.73
VARS-219ENST00000461328 MED9Q9NWA0 146 aa10.52□□□□□ -0.73
VARS-219ENST00000461328 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
VARS-219ENST00000461328 LY96Q9Y6Y9 160 aa10.52□□□□□ -0.73
VARS-219ENST00000461328 A0A087WWL8 130 aa10.51□□□□□ -0.73
VARS-219ENST00000461328 BLOC1S1P78537 153 aa10.51□□□□□ -0.73
VARS-219ENST00000461328 DAZAP1Q96EP5 407 aaKnown RBP10.51□□□□□ -0.73
VARS-219ENST00000461328 SAMD10Q9BYL1 202 aa10.51□□□□□ -0.73
VARS-219ENST00000461328 SCRT2Q9NQ03 307 aa10.51□□□□□ -0.73
VARS-219ENST00000461328 TRAV9-2A0A087WT02 112 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 GAGE12JA6NER3 117 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 C16orf90A8MZG2 172 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 CXCL1P09341 107 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 EVI2AP22794 236 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 LINC00315P59091 139 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 GAGE1Q13065 139 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 GAGE4Q13068 117 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 GAGE5Q13069 117 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 GAGE13Q4V321 117 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 HERC2O95714 4834 aa10.5□□□□□ -0.73
VARS-219ENST00000461328 RAB19A4D1S5 217 aa10.49□□□□□ -0.73
VARS-219ENST00000461328 OR10J3Q5JRS4 329 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms