RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 TRGV2A0A075B6R0 118 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 TRAV26-1A0A087WT03 109 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 TRAV21A0A0B4J279 112 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 A0A0D9SG52 128 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 PGPEP1LA6NFU8 196 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 FBLL1A6NHQ2 334 aaKnown RBP4.8□□□□□ -1.64
NUP50-212ENST00000461194 H3BNG1 76 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 K7EQM0 130 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 VCYO14598 125 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 IGLV2-11P01706 119 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 SEC11BP0C7V7 166 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 ZNF415Q09FC8 603 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 OR5I1Q13606 314 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 TDRG1Q3Y452 100 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 MUC21Q5SSG8 566 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 FAM159AQ6UWV7 190 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 IQCF2Q8IXL9 164 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 CYB561D1Q8N8Q1 229 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 ATG101Q9BSB4 218 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 NDFIP1Q9BT67 221 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 DNAH10Q8IVF4 4471 aa4.8□□□□□ -1.64
NUP50-212ENST00000461194 DNAH6Q9C0G6 4158 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 MAP1LC3B2A6NCE7 125 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 FAM74A7A6NL05 159 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 F6UZH7 168 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 BCL2L11O43521 198 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 FGF8P55075 233 aaPredicted RBP4.79□□□□□ -1.64
NUP50-212ENST00000461194 EIF5AP63241 154 aaKnown RBP4.79□□□□□ -1.64
NUP50-212ENST00000461194 FLI1Q01543 452 aaPredicted RBP4.79□□□□□ -1.64
NUP50-212ENST00000461194 GAGE1Q13065 139 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 GAGE4Q13068 117 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 TMEM183BQ1AE95 376 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 TMEM183AQ8IXX5 376 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 TMEM75Q8N9X5 138 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 STOML3Q8TAV4 291 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 RASL10AQ92737 203 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 SPXQ9BT56 116 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 ZNF471Q9BX82 626 aaPredicted RBP4.79□□□□□ -1.64
NUP50-212ENST00000461194 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
NUP50-212ENST00000461194 MAP1LC3BQ9GZQ8 125 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 MRPL16Q9NX20 251 aaKnown RBP4.79□□□□□ -1.64
NUP50-212ENST00000461194 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
NUP50-212ENST00000461194 IGLV2-18A0A075B6J9 118 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 IGHV3-16A0A0C4DH30 117 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 A0A0J9YY99 117 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 UMAD1C9J7I0 102 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 GNRH2O43555 120 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 IFNA7P01567 189 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 TYMSP04818 313 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 PFN1P07737 140 aaKnown RBP4.78□□□□□ -1.64
NUP50-212ENST00000461194 FHITP49789 147 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 ZNF80P51504 273 aaPredicted RBP4.78□□□□□ -1.64
NUP50-212ENST00000461194 CCL18P55774 89 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 UBE2G2P60604 165 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 ZFP69Q49AA0 526 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 SMUG1Q53HV7 270 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 SAPCD1Q5SSQ6 148 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 TMUB2Q71RG4 321 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 PRNTQ86SH4 94 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 TCTE3Q8IZS6 198 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 MBD3L1Q8WWY6 194 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 HIST1H2BAQ96A08 127 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 VSIG2Q96IQ7 327 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 KCNS1Q96KK3 526 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 LINC00479Q96M42 142 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 SDF2L1Q9HCN8 221 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 LINC00588Q9Y4M8 146 aa4.78□□□□□ -1.64
NUP50-212ENST00000461194 TRAV34A0A0B4J273 112 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 M0R2N4 97 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 M0R2P5 195 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 PEX7O00628 323 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 PFDN1O60925 122 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 GCGP01275 180 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 IGHV3-53P01767 116 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 TPT1P13693 172 aaKnown RBP4.77□□□□□ -1.65
NUP50-212ENST00000461194 PPT1P50897 306 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 SLAQ13239 276 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 DPPA3Q6W0C5 159 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 Q6ZR54 194 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 LINC00336Q6ZUF6 198 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 ZNRF2Q8NHG8 242 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 FAM213BQ8TBF2 198 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 SFT2D1Q8WV19 159 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 TCEAL7Q9BRU2 100 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 PRO0255Q9UI72 69 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 ARL2-SNX15V9GYD0 113 aa4.77□□□□□ -1.65
NUP50-212ENST00000461194 DNAH2Q9P225 4427 aa4.76□□□□□ -1.65
NUP50-212ENST00000461194 A0A096LPF7 62 aa4.76□□□□□ -1.65
NUP50-212ENST00000461194 CRYBA4P53673 196 aa4.76□□□□□ -1.65
NUP50-212ENST00000461194 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
NUP50-212ENST00000461194 ESRGQ1W209 222 aa4.76□□□□□ -1.65
NUP50-212ENST00000461194 LGALSLQ3ZCW2 172 aaPredicted RBP4.76□□□□□ -1.65
NUP50-212ENST00000461194 CST9LP1Q5W188 147 aa4.76□□□□□ -1.65
NUP50-212ENST00000461194 COX8CQ7Z4L0 72 aa4.76□□□□□ -1.65
NUP50-212ENST00000461194 Q86TA4 180 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms