RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 C16orf90A8MZG2 172 aa12.67□□□□□ -0.38
COL9A2-205ENST00000461118 RNASE3P12724 160 aaKnown RBP12.67□□□□□ -0.38
COL9A2-205ENST00000461118 CRIP1P50238 77 aa12.67□□□□□ -0.38
COL9A2-205ENST00000461118 MRPL23Q16540 153 aaKnown RBP12.67□□□□□ -0.38
COL9A2-205ENST00000461118 ZNF876PQ49A33 203 aa12.67□□□□□ -0.38
COL9A2-205ENST00000461118 A0A1B0GV50 99 aa12.66□□□□□ -0.38
COL9A2-205ENST00000461118 CIDEAO60543 219 aa12.66□□□□□ -0.38
COL9A2-205ENST00000461118 LTAP01374 205 aa12.66□□□□□ -0.38
COL9A2-205ENST00000461118 S100A9P06702 114 aaKnown RBP12.66□□□□□ -0.38
COL9A2-205ENST00000461118 ZC2HC1AQ96GY0 325 aa12.66□□□□□ -0.38
COL9A2-205ENST00000461118 ORM1P02763 201 aa12.65□□□□□ -0.38
COL9A2-205ENST00000461118 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
COL9A2-205ENST00000461118 SLC51BQ86UW2 128 aa12.65□□□□□ -0.38
COL9A2-205ENST00000461118 PGPEP1LA6NFU8 196 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 C9JCJ5 164 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 RS1O15537 224 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 AKR1C3P42330 323 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 SULT1A2P50226 295 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 ZNF674Q2M3X9 581 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 PIK3CD-AS1Q5SR53 167 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 FAM162BQ5T6X4 162 aa12.64□□□□□ -0.39
COL9A2-205ENST00000461118 K7EQD1 137 aa12.63□□□□□ -0.39
COL9A2-205ENST00000461118 CCL20P78556 96 aa12.63□□□□□ -0.39
COL9A2-205ENST00000461118 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
COL9A2-205ENST00000461118 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
COL9A2-205ENST00000461118 Q8N1X5 172 aa12.63□□□□□ -0.39
COL9A2-205ENST00000461118 IL36BQ9NZH7 164 aa12.63□□□□□ -0.39
COL9A2-205ENST00000461118 A0A1W2PPQ1 181 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 B4DEV8 164 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 KRBOX1C9JBD0 128 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 SH2D1AO60880 128 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 GYPEP15421 78 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-205ENST00000461118 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
COL9A2-205ENST00000461118 ASIPP42127 132 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
COL9A2-205ENST00000461118 hCG_2014768A0A024R1R8 64 aa12.61□□□□□ -0.39
COL9A2-205ENST00000461118 SCO2A0A1W2PP80 73 aa12.61□□□□□ -0.39
COL9A2-205ENST00000461118 TEX46H3BTG2 121 aa12.61□□□□□ -0.39
COL9A2-205ENST00000461118 C6orf223Q8N319 242 aa12.61□□□□□ -0.39
COL9A2-205ENST00000461118 TXNDC17Q9BRA2 123 aa12.61□□□□□ -0.39
COL9A2-205ENST00000461118 MLST8Q9BVC4 326 aa12.61□□□□□ -0.39
COL9A2-205ENST00000461118 SRIP30626 198 aa12.6□□□□□ -0.39
COL9A2-205ENST00000461118 LINC01559Q495D7 138 aa12.6□□□□□ -0.39
COL9A2-205ENST00000461118 C9orf62Q8N4C0 152 aa12.6□□□□□ -0.39
COL9A2-205ENST00000461118 PCNPQ8WW12 178 aaKnown RBP12.6□□□□□ -0.39
COL9A2-205ENST00000461118 GNG13Q9P2W3 67 aa12.6□□□□□ -0.39
COL9A2-205ENST00000461118 TRBV6-4A0A1B0GX49 114 aa12.59□□□□□ -0.39
COL9A2-205ENST00000461118 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
COL9A2-205ENST00000461118 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
COL9A2-205ENST00000461118 KRTAP1-5Q9BYS1 174 aa12.59□□□□□ -0.39
COL9A2-205ENST00000461118 A8MWV9 139 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 M0R036 132 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 SIVA1O15304 175 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 NXPH4O95158 308 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 ZFP2Q6ZN57 461 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 BAGE2Q86Y30 109 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 SLC25A29Q8N8R3 303 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 C11orf52Q96A22 123 aa12.58□□□□□ -0.4
COL9A2-205ENST00000461118 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
COL9A2-205ENST00000461118 NHLRC2Q8NBF2 726 aa12.57□□□□□ -0.4
COL9A2-205ENST00000461118 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
COL9A2-205ENST00000461118 LOC100131303A0A0U1RQF7 123 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 GRIFINA4D1Z8 144 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 H3BVH4 76 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
COL9A2-205ENST00000461118 RPL35P42766 123 aaKnown RBP12.56□□□□□ -0.4
COL9A2-205ENST00000461118 TIRAPP58753 221 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 RHOHQ15669 191 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 PRADC1Q9BSG0 188 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 PARLQ9H300 379 aa12.56□□□□□ -0.4
COL9A2-205ENST00000461118 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
COL9A2-205ENST00000461118 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
COL9A2-205ENST00000461118 CXCL1P09341 107 aa12.54□□□□□ -0.4
COL9A2-205ENST00000461118 MEF2BQ02080 365 aaPredicted RBP12.54□□□□□ -0.4
COL9A2-205ENST00000461118 UFSP1Q6NVU6 142 aa12.54□□□□□ -0.4
COL9A2-205ENST00000461118 SPATA12Q7Z6I5 190 aa12.54□□□□□ -0.4
COL9A2-205ENST00000461118 TMSB15BA0A087X1C1 80 aa12.53□□□□□ -0.4
COL9A2-205ENST00000461118 PDE6DO43924 150 aa12.53□□□□□ -0.4
COL9A2-205ENST00000461118 IFNA1P01562 189 aa12.53□□□□□ -0.4
COL9A2-205ENST00000461118 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
COL9A2-205ENST00000461118 JPT2Q9H910 190 aa12.53□□□□□ -0.4
COL9A2-205ENST00000461118 PHLDA3Q9Y5J5 127 aa12.53□□□□□ -0.4
COL9A2-205ENST00000461118 K7EP13 123 aa12.52□□□□□ -0.41
COL9A2-205ENST00000461118 KRTAP10-2P60368 255 aa12.52□□□□□ -0.41
COL9A2-205ENST00000461118 Q6ZSN1 163 aa12.52□□□□□ -0.41
COL9A2-205ENST00000461118 SFRP2Q96HF1 295 aa12.52□□□□□ -0.41
COL9A2-205ENST00000461118 A0A1B0GVG6 124 aa12.51□□□□□ -0.41
COL9A2-205ENST00000461118 BCL2P10415 239 aa12.51□□□□□ -0.41
COL9A2-205ENST00000461118 TAGLN2P37802 199 aaKnown RBP12.51□□□□□ -0.41
COL9A2-205ENST00000461118 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
COL9A2-205ENST00000461118 SAMD10Q9BYL1 202 aa12.51□□□□□ -0.41
COL9A2-205ENST00000461118 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
COL9A2-205ENST00000461118 RHODO00212 210 aa12.5□□□□□ -0.41
COL9A2-205ENST00000461118 IGLV2-8P01709 118 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms