RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 LINC00167Q96N53 147 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 CCL13Q99616 98 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 NPCDR1Q9BY65 106 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 BET1LQ9NYM9 111 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 IL36BQ9NZH7 164 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ICOSQ9Y6W8 199 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 BRWD1Q9NSI6 2320 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 IGLV4-60A0A075B6I1 120 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 DPRXA6NFQ7 191 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 A8MUU9 505 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 C17orf112F2Z3M2 114 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 SLC17A3O00476 420 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 TAX1BP3O14907 124 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 TNFP01375 233 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 IGHG2P01859 326 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 MT-ND6P03923 174 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 CD7P09564 240 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 NBEAP1P0C6P0 100 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 S100GP29377 79 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 GABRA2P47869 451 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 PRRC2AP48634 2157 aaKnown RBP1.76□□□□□ -2.13
HPS3-203ENST00000460822 RHOBP62745 196 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 CACNA1DQ01668 2161 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ZNF90Q03938 601 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 PMCHL1Q16048 86 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ATOH7Q8N100 152 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ANKRD29Q8N6D5 301 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ST6GALNAC3Q8NDV1 305 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 LMX1AQ8TE12 382 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 TMEM147Q9BVK8 224 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 TP73-AS1Q9UF72 201 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ZNF835Q9Y2P0 537 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 RBM7Q9Y580 266 aaKnown RBP1.76□□□□□ -2.13
HPS3-203ENST00000460822 V9GYV3 84 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 FRYLO94915 3013 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 FREM2Q5SZK8 3169 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 IGLV3-12A0A075B6K2 115 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 IGKV1OR2-108A0A075B7D4 117 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 IGLV3-32A0A0A0MS00 114 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 TRAV38-1A0A0B4J264 116 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 hADV38S2A0JD32 116 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 ODAMA1E959 279 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 OR2T8A6NH00 312 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 C9JCJ5 164 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 H3BMM0 161 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 K7EM74 188 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 K7ERU9 68 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 COX7A2LO14548 114 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 HLA-DRB1P01911 266 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 ARL14EPLP0DKL9 152 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 INAFM2P0DMQ5 153 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 SRIP30626 198 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 GUCA1AP43080 201 aaPredicted RBP1.75□□□□□ -2.13
HPS3-203ENST00000460822 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.75□□□□□ -2.13
HPS3-203ENST00000460822 TMEM136Q6ZRR5 245 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 OR8I2Q8N0Y5 310 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 FAM19A2Q8N3H0 131 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 ZFAND2AQ8N6M9 145 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 TSKUQ8WUA8 353 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 UBE2WQ96B02 151 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 TXNDC17Q9BRA2 123 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 NAT8BQ9UHF3 227 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 LINC00588Q9Y4M8 146 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 LY96Q9Y6Y9 160 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 U3KQK5 164 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 SDK2Q58EX2 2172 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 VPS13AQ96RL7 3174 aa1.75□□□□□ -2.13
HPS3-203ENST00000460822 NBEAQ8NFP9 2946 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 TRGV10A0A0A0MS01 117 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 IGHV3-15A0A0B4J1V0 119 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 TRAV26-2A0A0B4J265 109 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 MUC21A0A0G2JKD1 596 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SPTY2D1-AS1A0A0U1RR47 76 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 MUC21A0A140T8X8 626 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 C2orf70A6NJV1 201 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 C16orf90A8MZG2 172 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 CORTO00230 105 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SPINK4O60575 86 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SH2D1AO60880 128 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 IGLV7-43P04211 117 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 OR10J4P0C629 311 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 PSG9Q00887 426 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 EIF4EBP1Q13541 118 aaPredicted RBP1.74□□□□□ -2.13
HPS3-203ENST00000460822 IGFBP7Q16270 282 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SMIM21Q3B7S5 101 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 Q56UQ5 140 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 BVES-AS1Q5T3Y7 98 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 FAM27BQ5VT28 67 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 AMMECR1LQ6DCA0 310 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 TCF24Q7RTU0 167 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SCXQ7RTU7 201 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SPATA12Q7Z6I5 190 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 GPHB5Q86YW7 130 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 ZNF439Q8NDP4 499 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 OR10P1Q8NGE3 313 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 OR8B3Q8NGG8 313 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 OR5A2Q8NGI9 324 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 C18orf32Q8TCD1 76 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 KLF14Q8TD94 323 aaPredicted RBP1.74□□□□□ -2.13
HPS3-203ENST00000460822 OR8B2Q96RD0 313 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms