RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 STAG3L4Q8TBR4 150 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 RASSF5Q8WWW0 418 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 H1FXQ92522 213 aaKnown RBP1.08□□□□□ -2.24
RFC4-211ENST00000460408 MALSU1Q96EH3 234 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 C14orf144Q96I85 54 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 IMMP2LQ96T52 175 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 OR2J1Q9GZK6 312 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 OR51I2Q9H344 312 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 C11orf68Q9H3H3 251 aaKnown RBP1.08□□□□□ -2.24
RFC4-211ENST00000460408 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.08□□□□□ -2.24
RFC4-211ENST00000460408 VPS29Q9UBQ0 182 aa1.08□□□□□ -2.24
RFC4-211ENST00000460408 MACF1Q9UPN3 7388 aaKnown RBP1.08□□□□□ -2.24
RFC4-211ENST00000460408 DEFB131BA0A096LNP1 70 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 TGIF2-C20orf24A0A0A6YYL0 155 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 A0A1B0GV72 72 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 OR4C45A6NMZ5 311 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 M0R036 132 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 SLC22A1O15245 554 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 NAPSAO96009 420 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 ISG15P05161 165 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 LGALS1P09382 135 aaKnown RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 SCTP09683 121 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 ZNF705DP0CH99 300 aaPredicted RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 ZNF705BP0CI00 300 aaPredicted RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 HIST1H1EP10412 219 aaKnown RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 SCGB1A1P11684 91 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 RPS4Y1P22090 263 aaKnown RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 MAGEA12P43365 314 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 RPL5P46777 297 aaKnown RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 RPL30P62888 115 aaKnown RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 RPL19P84098 196 aaKnown RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 RUNX1Q01196 453 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 AKR1C1Q04828 323 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 GRK1Q15835 563 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 WHAMMP3Q1A5X7 153 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 ACOT6Q3I5F7 207 aaPredicted RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 C1orf140Q5VVS0 124 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 TRIQKQ629K1 86 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 LPCAT4Q643R3 524 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 SFXN4Q6P4A7 337 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 CD200R1LQ6Q8B3 271 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 HIST2H3AQ71DI3 136 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 COA5Q86WW8 74 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 OR5AS1Q8N127 324 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 DYNAPQ8N1N2 210 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 STX19Q8N4C7 294 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 SMIM20Q8N5G0 67 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 FAM216BQ8N7L0 139 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 ZNF676Q8N7Q3 588 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 ACOT12Q8WYK0 555 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 SLC7A6Q92536 515 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 SDF2Q99470 211 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 PFDN5Q99471 154 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 GGACTQ9BVM4 153 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 MIXL1Q9H2W2 232 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 NMNAT1Q9HAN9 279 aaPredicted RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 GPR84Q9NQS5 396 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 FGFR1OP2Q9NVK5 253 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 GSKIPQ9P0R6 139 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 AK3Q9UIJ7 227 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 SLC35A3Q9Y2D2 325 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 NOP16Q9Y3C1 178 aaKnown RBP1.07□□□□□ -2.24
RFC4-211ENST00000460408 PXMP4Q9Y6I8 212 aa1.07□□□□□ -2.24
RFC4-211ENST00000460408 IGKV1D-42A0A075B6H8 117 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 TRAV7A0A075B6U4 112 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 A0A087WUJ7 227 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 PRORSD1PA6NEY8 169 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 FAM159BA6NKW6 160 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 A8MT66 165 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 FAAHO00519 579 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 CHP2O43745 196 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 ZNF737O75373 536 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 HAND1O96004 215 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 GYPAP02724 150 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 TFF1P04155 84 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 RBP1P09455 135 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 SMIM6P0DI80 62 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 MT1HL1P0DM35 61 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 DEFA4P12838 97 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 GPX2P18283 190 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 PSMB8P28062 276 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 HLA-DMBP28068 263 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 AKR1C3P42330 323 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 RPL28P46779 137 aaKnown RBP1.06□□□□□ -2.24
RFC4-211ENST00000460408 TAS2R41P59536 307 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 CDC42P60953 191 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 TMEM258P61165 79 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 RPL38P63173 70 aaKnown RBP1.06□□□□□ -2.24
RFC4-211ENST00000460408 OR2F1Q13607 317 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 MINOS1Q5TGZ0 78 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 OR2T2Q6IF00 324 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 LPCAT3Q6P1A2 487 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 TMED4Q7Z7H5 227 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 ANGPTL5Q86XS5 388 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 C10orf111Q8N326 155 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 OR8B12Q8NGG6 310 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 OR4K15Q8NH41 348 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 DYNLRB2Q8TF09 96 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 MAGOHBQ96A72 148 aaKnown RBP1.06□□□□□ -2.24
RFC4-211ENST00000460408 TESCQ96BS2 214 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms