RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 ZC2HC1BQ5TFG8 222 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 GTSF1LQ9H1H1 148 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 TMSB15BA0A087X1C1 80 aa12.06□□□□□ -0.48
CMTM3-203ENST00000460097 FABP5P3A8MUU1 101 aa12.06□□□□□ -0.48
CMTM3-203ENST00000460097 MFAP4P55083 255 aa12.06□□□□□ -0.48
CMTM3-203ENST00000460097 NPBQ8NG41 125 aa12.06□□□□□ -0.48
CMTM3-203ENST00000460097 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
CMTM3-203ENST00000460097 FBN1P35555 2871 aaKnown RBP12.06□□□□□ -0.48
CMTM3-203ENST00000460097 A0A087WX48 190 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 GAGE13Q4V321 117 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 TMEM158Q8WZ71 300 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 IGLV11-55A0A075B6I3 123 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 TRBV7-3A0A075B6L6 115 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 K7ERJ3 54 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 NDUFA3O95167 84 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 APELAP0DMC3 54 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 FXYD7P58549 80 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 WFDC2Q14508 124 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 LY6EQ16553 131 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 KRTAP21-3Q3LHN1 58 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 MYOZ3Q8TDC0 251 aa12.05□□□□□ -0.48
CMTM3-203ENST00000460097 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-203ENST00000460097 SMAGPQ0VAQ4 97 aa12.04□□□□□ -0.48
CMTM3-203ENST00000460097 KRTAP24-1Q3LI83 254 aa12.04□□□□□ -0.48
CMTM3-203ENST00000460097 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
CMTM3-203ENST00000460097 GTSCR1Q86UQ5 136 aa12.04□□□□□ -0.48
CMTM3-203ENST00000460097 ASCL2Q99929 193 aa12.04□□□□□ -0.48
CMTM3-203ENST00000460097 IGHV4-4A0A075B6R2 117 aa12.03□□□□□ -0.48
CMTM3-203ENST00000460097 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
CMTM3-203ENST00000460097 TIMM23O14925 209 aa12.03□□□□□ -0.48
CMTM3-203ENST00000460097 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
CMTM3-203ENST00000460097 RAB9AP51151 201 aa12.03□□□□□ -0.48
CMTM3-203ENST00000460097 ZNF80P51504 273 aaPredicted RBP12.03□□□□□ -0.48
CMTM3-203ENST00000460097 NCBP2LA6PVI3 153 aaKnown RBP12.02□□□□□ -0.48
CMTM3-203ENST00000460097 K7EMI3 77 aa12.02□□□□□ -0.48
CMTM3-203ENST00000460097 CNIH1O95406 144 aa12.02□□□□□ -0.48
CMTM3-203ENST00000460097 LAGE3Q14657 143 aa12.02□□□□□ -0.48
CMTM3-203ENST00000460097 A6NDX4 124 aa12.02□□□□□ -0.49
CMTM3-203ENST00000460097 NBR2O15453 112 aa12.02□□□□□ -0.49
CMTM3-203ENST00000460097 IGHG4P01861 327 aa12.02□□□□□ -0.49
CMTM3-203ENST00000460097 TCTAP57738 103 aa12.02□□□□□ -0.49
CMTM3-203ENST00000460097 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.02□□□□□ -0.49
CMTM3-203ENST00000460097 CFHR4Q92496 578 aa12.02□□□□□ -0.49
CMTM3-203ENST00000460097 VCX2Q9H322 139 aa12.02□□□□□ -0.49
CMTM3-203ENST00000460097 TMEM238LA0A1B0GVL6 79 aa12.01□□□□□ -0.49
CMTM3-203ENST00000460097 F8W735 103 aaPredicted RBP12.01□□□□□ -0.49
CMTM3-203ENST00000460097 TMEM219Q86XT9 240 aa12.01□□□□□ -0.49
CMTM3-203ENST00000460097 MRAP2Q96G30 205 aa12.01□□□□□ -0.49
CMTM3-203ENST00000460097 FANCD2OSQ96PS1 177 aa12.01□□□□□ -0.49
CMTM3-203ENST00000460097 MRPL35Q9NZE8 188 aaKnown RBP12.01□□□□□ -0.49
CMTM3-203ENST00000460097 HES1Q14469 280 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 WFDC3Q8IUB2 231 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 MAPKAPK5-AS1Q8N8E1 139 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 NRACQ8N912 160 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 F8VRH5 84 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 H7C1H1 209 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 ORM1P02763 201 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 KLK9Q2XQG4 91 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 MRPL53Q96EL3 112 aaKnown RBP12□□□□□ -0.49
CMTM3-203ENST00000460097 TTTY13Q9BZ97 58 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 C21orf62Q9NYP8 219 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 MSRB1Q9NZV6 116 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 KLK9Q9UKQ9 250 aa12□□□□□ -0.49
CMTM3-203ENST00000460097 H3BMG7 143 aa11.99□□□□□ -0.49
CMTM3-203ENST00000460097 ETDBQ3ZM63 59 aa11.99□□□□□ -0.49
CMTM3-203ENST00000460097 HIST1H4GQ99525 98 aa11.99□□□□□ -0.49
CMTM3-203ENST00000460097 MDFIQ99750 246 aa11.99□□□□□ -0.49
CMTM3-203ENST00000460097 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
CMTM3-203ENST00000460097 MYMXA0A1B0GTQ4 84 aa11.98□□□□□ -0.49
CMTM3-203ENST00000460097 A6NJY4 79 aa11.98□□□□□ -0.49
CMTM3-203ENST00000460097 EBI3Q14213 229 aa11.98□□□□□ -0.49
CMTM3-203ENST00000460097 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
CMTM3-203ENST00000460097 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
CMTM3-203ENST00000460097 TMEM89A2RUT3 159 aa11.97□□□□□ -0.49
CMTM3-203ENST00000460097 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.97□□□□□ -0.49
CMTM3-203ENST00000460097 SLC50A1Q9BRV3 221 aa11.97□□□□□ -0.49
CMTM3-203ENST00000460097 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
CMTM3-203ENST00000460097 CKS1BP61024 79 aa11.97□□□□□ -0.49
CMTM3-203ENST00000460097 C5orf64Q2M2E5 130 aa11.97□□□□□ -0.49
CMTM3-203ENST00000460097 LYRM7Q5U5X0 104 aa11.97□□□□□ -0.49
CMTM3-203ENST00000460097 Q8TAT8 98 aa11.97□□□□□ -0.49
CMTM3-203ENST00000460097 OR11H12B2RN74 326 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 GAS8-AS1O95177 125 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 NDUFA7O95182 113 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 FOXI1Q12951 378 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 ORMDL2Q53FV1 153 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 CFAP126Q5VTH2 177 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 Q6ZSV7 163 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 SH2D6Q7Z4S9 175 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 OR11H1Q8NG94 326 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 OR11H2Q8NH07 326 aa11.96□□□□□ -0.49
CMTM3-203ENST00000460097 PLXNB1O43157 2135 aa11.96□□□□□ -0.5
CMTM3-203ENST00000460097 MORN3Q6PF18 240 aaPredicted RBP11.95□□□□□ -0.5
CMTM3-203ENST00000460097 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
CMTM3-203ENST00000460097 CYSLTR1Q9Y271 337 aa11.95□□□□□ -0.5
CMTM3-203ENST00000460097 MOB4Q9Y3A3 225 aa11.95□□□□□ -0.5
CMTM3-203ENST00000460097 APOMO95445 188 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms